Our Publications

Publications in 'Journals'

Papers in Journals

Lara Dular, Žiga Špiclin

Analysis of brain age gap across subject cohorts and prediction model architectures

Biomedicines, 12(9):2139, 2024

JCR Impact Factor: 3.9 (2023) -- Best Category: 85/354 pharmacology & pharmacy -- Quartile: 1

Papers in Journals

Žiga Bizjak, Žiga Špiclin

Aneurysm growth evaluation and detection: a computer-assisted follow-up MRA analysis

Scientific Reports, 14:19609, 2024

JCR Impact Factor: 3.8 (2024) -- Best Category: 25/134 multidisciplinary sciences -- Quartile: 1

Papers in Journals

Andrej Planinc, Nina Špegel, Zala Podobnik, Uroš Šinigoj, Petra Skubic, June Ho Choi, Wonhyoung Park, Tina Robič, Nika Tabor, Leon Jarabek, Žiga Špiclin, Žiga Bizjak

Assessing accuracy and consistency in intracranial aneurysm sizing: human expertise vs. artificial intelligence

Scientific Reports, 14:16080, 2024

JCR Impact Factor: 3.8 (2024) -- Best Category: 25/134 multidisciplinary sciences -- Quartile: 1

Papers in Journals

Lara Dular, Žiga Špiclin

BASE: brain age standardized evaluation

NeuroImage, 285:120469, 2024

JCR Impact Factor: 4.7 (2023) -- Best Category: 1/15 neuroimaging -- Quartile: 1

Papers in Journals

Sepideh Amiri, Reza Karimzadeh, Tomaž Vrtovec, Erik Gudmann Steuble Brandt, Henrik S. Thomsen, Michael Brun Andersen, Christoph Felix Müller, Anders Bertil Rodell, Bulat Ibragimov

Centerline-guided reinforcement learning model for pancreatic duct identifications

Journal of Medical Imaging, 11(6):064002, 2024

JCR Impact Factor: 1.9 (2023) -- Best Category: 103/204 radiology, nuclear medicine & medical imaging -- Quartile: 3

Papers in Journals

Domen Rački, Dejan Tomaževič, Danijel Skočaj

Coupling of unsupervised and supervised deep learning-based approaches for surface anomaly detection

Journal of Electronic Imaging, 33(3):031207, 2024

JCR Impact Factor: 1.0 (2023) -- Best Category: 285/352 engineering, electrical & electronic -- Quartile: 4

Papers in Journals

Žiga Bizjak, Tina Robič

DentAge: Deep learning for automated age prediction using panoramic dental X-ray images

Journal of Forensic Sciences, 2024

JCR Impact Factor: 1.5 (2023) -- Best Category: 10/23 medicine, legal -- Quartile: 2

Papers in Journals

Ernesto Pini, Peter Naglič, Miran Bürmen, Alexander Gatto, Henrik Schäfer, Diederik S. Wiersma, Lorenzo Pattelli

Experimental determination of effective light transport properties in fully anisotropic media

Advanced Photonics Nexus, 3(5):056017, 2024

Papers in Journals

Lara Dular, Franjo Pernuš, Žiga Špiclin

Extensive T1-weighted MRI preprocessing improves generalizability of deep brain age prediction models

Computers in Biology and Medicine, 173:108320, 2024

JCR Impact Factor: 7.0 (2023) -- Best Category: 2/65 mathematical & computational biology -- Quartile: 1

Papers in Journals

Gašper Podobnik, Bulat Ibragimov, Elias Tappeiner, Chanwoong Lee, Jin Sung Kim, Zacharia Mesbah, Romain Modzelweski, Yihao Ma, Fan Yang, Mikołaj Rudecki, Marek Wodziński, Primož Peterlin, Primož Strojan, Tomaž Vrtovec

HaN-Seg: The head and neck organ-at-risk CT and MR segmentation challenge

Radiotherapy and Oncology, 198:110410, 2024

JCR Impact Factor: 4.9 (2023) -- Best Category: 20/204 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Maj Jožef, Igor Locatelli, Gregor Brecl Jakob, Lina Savšek, Katarina Šurlan Popovič, Žiga Špiclin, Uroš Rot, Mitja Kos

Psychometric evaluation of the 5-item Medication Adherence Report Scale questionnaire in persons with multiple sclerosis

PLoS One, 19(3):e0294116, 2024

JCR Impact Factor: 2.9 (2023) -- Best Category: 31/134 multidisciplinary sciences -- Quartile: 1

Papers in Journals

Sepideh Amiri, Tomaž Vrtovec, Tamerlan Mustafaev, Christopher L. Deufel, Henrik S. Thomsen, Martin Hylleholt Sillesen, Erik Gudmann Steuble Brandt, Michael Brun Andersen, Christoph Felix Müller, Bulat Ibragimov

Reinforcement learning-based anatomical maps for pancreas sub-region and duct segmentation

Medical Physics, 51(10):7378-7392, 2024

JCR Impact Factor: 3.2 (2023) -- Best Category: 46/204 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Gašper Podobnik, Bulat Ibragimov, Primož Peterlin, Primož Strojan, Tomaž Vrtovec

vOARiability: interobserver and intermodality variability analysis in OAR contouring from head and neck CT and MR images

Medical Physics, 51(3):2175-2186, 2024

JCR Impact Factor: 3.2 (2023) -- Best Category: 46/204 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Žiga Bizjak, Žiga Špiclin

A systematic review of deep-learning methods for intracranial aneurysm detection in CT angiography

Biomedicines, 11(11):2921, 2023

JCR Impact Factor: 3.9 (2023) -- Best Category: 85/354 pharmacology & pharmacy -- Quartile: 1

Papers in Journals

Žiga Bizjak, June Ho Choi, Wonhyoung Park, Franjo Pernuš, Žiga Špiclin

Deep geometric learning for intracranial aneurysm detection: towards expert rater performance

Journal of Neurointerventional Surgery, 020905, 2023

JCR Impact Factor: 4.5 (2023) -- Best Category: 2/15 neuroimaging -- Quartile: 1

Papers in Journals

Gašper Podobnik, Primož Strojan, Primož Peterlin, Bulat Ibragimov, Tomaž Vrtovec

HaN-Seg: The head and neck organ-at-risk CT & MR segmentation dataset

Medical Physics, 50(3):1917-1927, 2023

JCR Impact Factor: 3.2 (2023) -- Best Category: 46/204 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Lara Dular, Gregor Brecl Jakob, Lina Savšek, Jožef Magdič, Bojan Rojc, Žiga Špiclin

Napovedovanje kliničnega poteka multiple skleroze iz magnetnoresonančnih slik: predhodni rezultati raziskave

Medicinski razgledi, 62(suppl. 1):51-57, 2023

Papers in Journals

Shirin Barimani, Rok Šibanc, Dejan Tomaževič, Robin Meier, Peter Kleinebudde

100% visual inspection of tablets produced with continuous direct compression and coating

International Journal of Pharmaceutics, 614:121465, 2022

JCR Impact Factor: 5.8 (2022) -- Best Category: 40/277 pharmacology & pharmacy -- Quartile: 1

Papers in Journals

Danis Alukaev, Semen Kiselev, Tamerlan Mustafaev, Ahatov Ainur, Bulat Ibragimov, Tomaž Vrtovec

A deep learning framework for vertebral morphometry and Cobb angle measurement with external validation

European Spine Journal, 31(8):2115-2124, 2022

JCR Impact Factor: 2.8 (2022) -- Best Category: 27/86 orthopedics -- Quartile: 2

Papers in Journals

Ivana Išgum, Bennett A. Landman, Tomaž Vrtovec

Advances in High-Dimensional Medical Image Processing

Journal of Medical Imaging, 9(5):052401, 2022

JCR Impact Factor: 2.4 (2022) -- Best Category: 68/202 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Aichi Chien, Žiga Špiclin, Žiga Bizjak, Kambiz Nael

Computer-assisted aneurysm growth evaluation and detection (AGED): comparison with clinical aneurysm follow-up

Journal of Blood Disorders & Transfusion, 13(8):1000517, 2022

Papers in Journals

Leon Jarabek, Jan Jamšek, Anka Cuderman, Sebastijan Rep, Marko Hočevar, Tomaž Kocjan, Mojca Jensterle Sever, Žiga Špiclin, Žiga Maček Ležaić, Filip Cvetko, Luka Ležaič

Detection and localization of hyperfunctioning parathyroid glands on [18F]fluorocholine PET/CT using deep learning - model performance and comparison to human experts

Radiology and Oncology, 56(4):440-452, 2022

JCR Impact Factor: 2.4 (2022) -- Best Category: 79/135 radiology, nuclear medicine & medical imaging -- Quartile: 3

Papers in Journals

Domen Rački, Dejan Tomaževič, Danijel Skočaj

Detection of surface defects on pharmaceutical solid oral dosage forms with convolutional neural networks

Neural Computing & Applications, 34:631-650, 2022

JCR Impact Factor: 6.0 (2022) -- Best Category: 41/145 computer science, artificial intelligence -- Quartile: 2

Papers in Journals

Miran Bürmen, Franjo Pernuš, Peter Naglič

MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package

Journal of Biomedical Optics, 27(8):083012, 2022

JCR Impact Factor: 3.5 (2022) -- Best Category: 38/135 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Imad Eddine Ibrahim Bekkouch, Bulat Maksudov, Semen Kiselev, Tamerlan Mustafaev, Tomaž Vrtovec, Bulat Ibragimov

Multi-landmark environment analysis with reinforcement learning for pelvic abnormality detection and quantification

Medical Image Analysis, 78:102417, 2022

JCR Impact Factor: 10.9 (2022) -- Best Category: 3/135 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Peter Naglič, Franjo Pernuš, Miran Bürmen

Reflectance calibration of multimode optical fiber probes by probe-to-target distance reflectance profile modeling

Measurement, 203:112002, 2022

JCR Impact Factor: 5.6 (2022) -- Best Category: 9/63 instruments & instrumentation -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Bulat Ibragimov

Spinopelvic measurements of sagittal balance with deep learning: systematic review and critical evaluation

European Spine Journal, 31(8):2031-2045, 2022

JCR Impact Factor: 2.8 (2022) -- Best Category: 27/86 orthopedics -- Quartile: 2

Papers in Journals

Žiga Bizjak, Franjo Pernuš, Žiga Špiclin

Deep shape features for predicting future intracranial aneurysm growth

Frontiers in Physiology, 12:644349, 2021

JCR Impact Factor: 4.755 (2021) -- Best Category: 20/81 physiology -- Quartile: 1

Papers in Journals

Lina Savšek, Tamara Stergar, Vojko Strojnik, Alojz Ihan, Aleš Koren, Žiga Špiclin, Saša Šega Jazbec

Impact of aerobic exercise on clinical and magnetic resonance imaging biomarkers in persons with multiple sclerosis: an exploratory randomized controlled trial

Journal of Rehabilitation Medicine, 53(4):jrm00178, 2021

JCR Impact Factor: 3.959 (2021) -- Best Category: 13/68 rehabilitation -- Quartile: 1

Papers in Journals

Žiga Bizjak, Žiga Špiclin

Napovedovanje prihodnje rasti intrakranialnih anevrizem

Elektrotehniški vestnik - Electrotechnical Review, 88(3):136-140, 2021

Papers in Journals

Miran Bürmen

Vrednotenje vpliva števila linearno razporejenih optičnih vlaken na kakovost napovedi optičnih lastnosti sipajočih vzorcev iz zajete reflektance

Elektrotehniški vestnik - Electrotechnical Review, 88(1-2):41-48, 2021

Papers in Journals

Robert Korez, Michael Putzier, Tomaž Vrtovec

A deep learning tool for fully automated measurements of sagittal spinopelvic balance from X-ray images: performance evaluation

European Spine Journal, 29(9):2295-2305, 2020

JCR Impact Factor: 3.314 (2020) -- Best Category: 23/82 orthopedics -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Domen Močnik, Primož Strojan, Franjo Pernuš, Bulat Ibragimov

Auto-segmentation of organs at risk for head and neck radiotherapy planning: from atlas-based to deep learning methods

Medical Physics, 47(9):e929-e950, 2020

JCR Impact Factor: 4.071 (2020) -- Best Category: 27/186 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Tim Jerman, Aichi Chien, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Automated cutting plane positioning for intracranial aneurysm quantification

IEEE Transactions on Biomedical Engineering, 67(2):577-587, 2020

JCR Impact Factor: 4.538 (2020) -- Best Category: 24/90 engineering, biomedical -- Quartile: 2

Papers in Journals

Dejan Knez, Tomaž Vrtovec

Computerized three-dimensional pedicle morphometry from computed tomography images of the thoracic spine

Image Analysis & Stereology, 39(2):101-109, 2020

JCR Impact Factor: 0.682 (2020) -- Best Category: 239/265 mathematics, applied -- Quartile: 4

Papers in Journals

Maksym Kholiavchenko, Ilyas Sirazitdinov, Konstantin Kubrak, Rushania Badrutdinova, Ramil Kuleev, Yuxian Yuan, Tomaž Vrtovec, Bulat Ibragimov

Contour-aware multi-label chest X-ray organ segmentation

International Journal of Computer Assisted Radiology and Surgery, 15(4):425-436, 2020

JCR Impact Factor: 2.155 (2018) -- Best Category: 83/203 surgery -- Quartile: 2

Papers in Journals

Peter Naglič, Yevhen Zelinskyi, Boštjan Likar, Miran Bürmen

Determination of refractive index, size, and solid content of monodisperse polystyrene microsphere suspensions for the characterization of optical phantoms

Biomedical Optics Express, 11(4):1901-1918, 2020

JCR Impact Factor: 3.732 (2020) -- Best Category: 23/99 optics -- Quartile: 1

Papers in Journals

Yevhen Zelinskyi, Peter Naglič, Franjo, Pernuš, Boštjan Likar, Miran Bürmen

Fast and accurate Monte Carlo simulations of subdiffusive spatially resolved reflectance for a realistic optical fiber probe tip model aided by a deep neural network

Biomedical Optics Express, 11(7):3875-3889, 2020

JCR Impact Factor: 3.732 (2020) -- Best Category: 23/99 optics -- Quartile: 1

Papers in Journals

Peter Naglič, Yevhen Zelinskyi, Luka Rogelj, Jošt Stergar, Matija Milanič, Jure Novak, Borut Kumperščak, Miran Bürmen

Optical properties of PlatSil SiliGlass tissue-mimicking phantoms

Biomedical Optics Express, 11(7):3753-3768, 2020

JCR Impact Factor: 3.732 (2020) -- Best Category: 23/99 optics -- Quartile: 1

Papers in Journals

Hennadii Madan, Rok Berlot, Nicola J. Ray, Franjo Pernuš, Žiga Špiclin

Practical priors for Bayesian inference of latent biomarkers

IEEE Journal of Biomedical and Health Informatics, 24(2):396-406, 2020

JCR Impact Factor: 5.772 (2020) -- Best Category: 5/58 mathematical & computational biology -- Quartile: 1

Papers in Journals

Hugo Jobidon-Lavergne, Samuel Kadoury, Dejan Knez, Carl-Éric Aubin

Biomechanically driven intraoperative spine registration during navigated anterior vertebral body tethering

Physics in Medicine and Biology, 64(11):115008, 2019

JCR Impact Factor: 3.030 (2018) -- Best Category: 39/129 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Dejan Knez, Imad S. Nahle, Tomaž Vrtovec, Stefan Parent, Samuel Kadoury

Computer-assisted pedicle screw trajectory planning using CT-inferred bone density: a demonstration against surgical outcomes

Medical Physics, 46(8):3543-3554, 2019

JCR Impact Factor: 3.177 (2018) -- Best Category: 35/129 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Matic Ivančič, Peter Naglič, Miran Bürmen

Določanje optičnih lastnosti sipajočih medijev s hiperspektralnim slikanjem

Elektrotehniški vestnik - Electrotechnical Review, 86(4):175-184, 2019

Papers in Journals

William Mandel, Olivier Turcot, Dejan Knez, Stefan Parent, Samuel Kadoury

Prediction outcomes for anterior vertebral body growth modulation surgery from discriminant spatiotemporal manifolds

International Journal of Computer Assisted Radiology and Surgery, 14:1565-1575, 2019

JCR Impact Factor: 2.155 (2018) -- Best Category: 83/203 surgery -- Quartile: 2

Papers in Journals

Peter Naglič, Luka Vidovič, Matija Milanič, Lise L. Randeberg, Boris Majaron

Suitability of diffusion approximation for an inverse analysis of diffuse reflectance spectra from human skin in vivo

OSA Continuum, 2(3):905-922, 2019

Papers in Journals

Rob C. Brink, Ludvig Vavruch, Tom P. C. Schlösser, Kasim Abul‑Kasim, Acke Ohlin, Hans Tropp, René M. Castelein, Tomaž Vrtovec

Three‑dimensional pelvic incidence is much higher in (thoraco)lumbar scoliosis than in controls

European Spine Journal, 28(3):544-550, 2019

JCR Impact Factor: 2.513 (2018) -- Best Category: 23/76 orthopedics -- Quartile: 2

Papers in Journals

Uroš Mitrović, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

3D-2D registration in endovascular image-guided surgery: evaluation of state-of-the-art methods on cerebral angiograms

International Journal of Computer Assisted Radiology and Surgery, 13(2):193-202, 2018

JCR Impact Factor: 2.155 (2018) -- Best Category: 83/203 surgery -- Quartile: 2

Papers in Journals

Alan Petrônio Pinheiro, Júlio Cézar Coelho, Antônio C. Paschoarelli Veiga, Tomaž Vrtovec

A computerized method for evaluating scoliotic deformities using elliptical pattern recognition in X-ray spine images

Computer Methods and Programs in Biomedicine, 161:85-92, 2018

JCR Impact Factor: 3.424 (2018) -- Best Category: 15/104 computer science, theory & methods -- Quartile: 1

Papers in Journals

Žiga Lesjak, Alfiia Galimzianova, Aleš Koren, Matej Lukin, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

A novel public MR image dataset of multiple sclerosis patients with lesion segmentations based on multi-rater consensus

Neuroinformatics, 16(1):51-63, 2018

JCR Impact Factor: 5.127 (2018) -- Best Category: 9/106 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Matic Ivančič, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Efficient estimation of subdiffusive optical parameters in real time from spatially resolved reflectance by artificial neural networks

Optics Letters, 43(12):2901-2904, 2018

JCR Impact Factor: 3.866 (2018) -- Best Category: 16/95 optics -- Quartile: 1

Papers in Journals

Domen Rački, Dejan Tomaževič, Danijel Skočaj

Enovita konvolucijska nevronska mreža za detekcijo anomalij na teksturiranih površinah

Elektrotehniški vestnik - Electrotechnical Review, 85(5):279-285, 2018

Papers in Journals

Tomaž Vrtovec

Image Analysis & Stereology: 2017 research highlights

Image Analysis & Stereology, 37(1):1001-1007, 2018

JCR Impact Factor: 1.778 (2018) -- Best Category: 53/254 mathematics, applied -- Quartile: 1

Papers in Journals

Andraž Mehle, Domen Kitak, Gregor Podrekar, Boštjan Likar, Dejan Tomaževič

In-line agglomeration degree estimation in fluidized bed pellet coating processes using visual imaging

International Journal of Pharmaceutics, 546(1-2):78-85, 2018

JCR Impact Factor: 4.213 (2018) -- Best Category: 44/267 pharmacology & pharmacy -- Quartile: 1

Papers in Journals

Gregor Podrekar, Domen Kitak, Andraž Mehle, Zoran Lavrič, Boštjan Likar, Dejan Tomaževič, Rok Dreu

In-line film coating thickness estimation of minitablets in a fluid-bed coating equipment

AAPS PharmSciTech, 19(8):3440-3453, 2018

JCR Impact Factor: 2.608 (2018) -- Best Category: 132/267 pharmacology & pharmacy -- Quartile: 2

Papers in Journals

Alfiia Galimzianova, Žiga Lesjak, Daniel L. Rubin, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Locally adaptive magnetic resonance intensity models for unsupervised segmentation of multiple sclerosis lesions

Journal of Medical Imaging, 5(1):011007, 2018

Papers in Journals

Uroš Petković, Robert Korez, Stefan Parent, Samuel Kadoury, Tomaž Vrtovec

Polavtomatsko merjenje 3D Cobbovega kota na trikotniški mreži modela hrbtenice

Elektrotehniški vestnik - Electrotechnical Review, 85(1-2):1-6, 2018

Papers in Journals

Robert Korez, Michael Putzier, Tomaž Vrtovec

Računalniško podprto merjenje parametrov sagitalne orientacije medenice iz rentgenskih slik

Zdravniški vestnik, 87(11-12):519-529, 2018

Papers in Journals

Hennadii Madan, Franjo Pernuš, Žiga Špiclin

Reference-free error estimation for multiple measurement methods

Statistical Methods in Medical Research, 28(7):2196-2209, 2018

JCR Impact Factor: 2.388 (2018) -- Best Category: 15/123 statistics & probability -- Quartile: 1

Papers in Journals

Domen Močnik, Bulat Ibragimov, Lei Xing, Primož Strojan, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of parotid glands from registered CT and MR images

Physica Medica, 52:33-41, 2018

JCR Impact Factor: 2.532 (2018) -- Best Category: 53/129 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Dejan Knez, Janez Mohar, Robert J. Cirman, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Variability analysis of manual and computer-assisted preoperative thoracic pedicle screw placement planning

Spine, 43(21):1487-1495, 2018

JCR Impact Factor: 2.903 (2018) -- Best Category: 19/76 orthopedics -- Quartile: 1

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

2D sub-pixel point spread function measurement using a virtual point-like source

International Journal of Computer Vision, 121(3):391-402, 2017

JCR Impact Factor: 11.541 (2017) -- Best Category: 1/132 computer science, artificial intelligence -- Quartile: 1

Papers in Journals

Hennadii Madan, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

A framework for automatic creation of gold-standard rigid 3D-2D registration datasets

International Journal of Computer Assisted Radiology and Surgery, 12(2):263-275, 2017

JCR Impact Factor: 1.961 (2017) -- Best Category: 89/200 surgery -- Quartile: 2

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Adopting higher-order similarity relations for improved estimation of optical properties from subdiffusive reflectance

Optics Letters, 42(7):1357-1360, 2017

JCR Impact Factor: 3.589 (2017) -- Best Category: 14/94 optics -- Quartile: 1

Papers in Journals

Žiga Lesjak, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Določitev optimalnih značilnic za zaznavo sprememb bele možganovine

Elektrotehniški vestnik - Electrotechnical Review, 84(3):85-92, 2017

Papers in Journals

Guoyan Zheng, Chengwen Chu, Daniel L. Belavy, Bulat Ibragimov, Robert Korez, Tomaž Vrtovec, Hugo Hutt, Richard Everson, Judith Meakin, Isabel Lopez Andrade, Ben Glocker, Hao Chen, Qi Dou, Pheng-Ann Heng, Chunliang Wang, Daniel Forsberg, Aleš Neubert, Jurgen Fripp, Martin Urschler, Darko Štern, Maria Wimmer, Alexey A. Novikov, Hui Cheng, Gabriele Armbrecht, Dieter Felsenberg, Shuo Li

Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: a grand challenge

Medical Image Analysis, 35:327-344, 2017

JCR Impact Factor: 5.356 (2017) -- Best Category: 6/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Andraž Mehle, Boštjan Likar, Dejan Tomaževič

In-line recognition of agglomerated pharmaceutical pellets with density-based clustering and convolutional neural network

IPSJ Transactions on Computer Vision and Applications, 9:7, 2017

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Lookup table-based sampling of the phase function for Monte Carlo simulations of light propagation in turbid media

Biomedical Optics Express, 8(3):1895-1910, 2017

JCR Impact Factor: 3.482 (2017) -- Best Category: 15/94 optics -- Quartile: 1

Papers in Journals

Timur Aksoy, Žiga Špiclin, Franjo Pernuš, Gözde Ünal

Monoplane 3D-2D registration of cerebral angiograms based on multi-objective stratified optimization

Physics in Medicine and Biology, 62(24):9377-9394, 2017

JCR Impact Factor: 2.665 (2017) -- Best Category: 27/78 engineering, biomedical -- Quartile: 2

Papers in Journals

Bulat Ibragimov, Robert Korez, Boštjan Likar, Franjo Pernuš, Lei Xing, Tomaž Vrtovec

Segmentation of pathological structures by landmark-assisted deformable models

IEEE Transactions on Medical Imaging, 36(7):1457-1469, 2017

JCR Impact Factor: 6.131 (2017) -- Best Category: 3/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Tom P.C. Schlösser, Michiel M.A. Janssen, Tom Hogervorst, Tomaž Vrtovec, John de Vos, F. Cumhur Öner, René M. Castelein

The odyssey of sagittal pelvic morphology during human evolution: a perspective on different hominoidae

The Spine Journal, 17(8):1202-1206, 2017

JCR Impact Factor: 3.119 (2017) -- Best Category: 11/77 orthopedics -- Quartile: 1

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Three-dimensional point spread function measurements of imaging spectrometers

Journal of Optics, 19(9):095002, 2017

JCR Impact Factor: 2.323 (2017) -- Best Category: 35/94 optics -- Quartile: 2

Papers in Journals

Miha Vodičar, Robert Košak, Matevž Gorenšek, Robert Korez, Tomaž Vrtovec, Jadran Koder, Vane Antolič, Rok Vengust

Vertebral end plate perforation for intervertebral disc height preservation after single level lumbar discectomy: a randomized controlled trial

Clinical Spine Surgery, 30(6):E707-E712, 2017

JCR Impact Factor: 1.987 (2017) -- Best Category: 35/77 orthopedics -- Quartile: 2

Papers in Journals

Matic Ivančič, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Virtually increased acceptance angle for efficient estimation of spatially resolved reflectance in the subdiffusive regime: a Monte Carlo study

Biomedical Optics Express, 8(11):4872-4886, 2017

JCR Impact Factor: 3.482 (2017) -- Best Category: 15/94 optics -- Quartile: 1

Papers in Journals

Miran Bürmen

Vpliv zmanjšanja simulacijskega volumna na napako in hitrost izračunov reflektance z metodo Monte Carlo

Elektrotehniški vestnik - Electrotechnical Review, 84(1-2):61-65, 2017

Papers in Journals

Ching-Wei Wang, Cheng-Ta Huang, Jia-Hong Lee, Chung-Hsing Li, Sheng-Wei Chang, Ming-Jhih Siao, Tat-Ming Lai, Bulat Ibragimov, Tomaž Vrtovec, Olaf Ronneberger, Philipp Fischer, Tim F. Cootes, Claudia Lindner

A benchmark for comparison of dental radiography analysis algorithms

Medical Image Analysis, 31:63-76, 2016

JCR Impact Factor: 4.188 (2016) -- Best Category: 8/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Jianhua Yao, Joseph E. Burns, Daniel Forsberg, Alexander Seitel, Abtin Rasoulian, Purang Abolmaesumi, Kerstin Hammernik, Martin Urschler, Bulat Ibragimov, Robert Korez, Tomaž Vrtovec, Isaac Castro-Mateos, Jose M. Pozo, Alejandro F. Frangi, Ronald M. Summers, Shuo Li

A multi-center milestone study of clinical vertebral CT segmentation

Computerized Medical Imaging and Graphics, 49:16-28, 2016

JCR Impact Factor: 1.738 (2016) -- Best Category: 72/126 radiology, nuclear medicine & medical imaging -- Quartile: 3

Papers in Journals

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Blob enhancement and visualization for improved intracranial aneurysm detection

IEEE Transactions on Visualization and Computer Graphics, 22(6):1705-1717, 2016

JCR Impact Factor: 2.254 (2016) -- Best Category: 14/106 computer science, sowtware engineering -- Quartile: 1

Papers in Journals

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Computer-assisted screw size and insertion trajectory planning for pedicle screw placement surgery

IEEE Transactions on Medical Imaging, 35(6):1420-1430, 2016

JCR Impact Factor: 3.942 (2016) -- Best Category: 9/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Deconvolution-based restoration of SWIR pushbroom imaging spectrometer images

Optics Express, 24(21):24704-24718, 2016

JCR Impact Factor: 3.307 (2016) -- Best Category: 16/92 optics -- Quartile: 1

Papers in Journals

Dejan Knez, Janez Mohar, Robert J. Cirman, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Določanje velikosti in vstavitvene trajektorije pedikularnih vijakov v računalniškotomografskih (CT) slikah deformacij prsne hrbtenice: primerjava ročnega in računalniško podprtega predoperacijskega načrtovanja

Zdravniški vestnik, 85(11-12):619-631, 2016

Papers in Journals

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Enhancement of vascular structures in 3D and 2D angiographic images

IEEE Transactions on Medical Imaging, 35(9):2107-2118, 2016

JCR Impact Factor: 3.942 (2016) -- Best Category: 9/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Estimation of optical properties by spatially resolved reflectance spectroscopy in the subdiffusive regime

Journal of Biomedical Optics, 21(9):095003, 2016

JCR Impact Factor: 2.530 (2016) -- Best Category: 40/126 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Tom P.C. Schlösser, Michiel M.A. Janssen, Tomaž Vrtovec, René M. Castelein

Letter to the editor concerning ‘‘Pelvic incidence: an anatomic investigation of 880 cadaveric specimens’’ by Weinberg DS, Morris WZ, Gebhart JJ, Liu RW: Eur Spine J (2015), doi: 10.1007/s00586-015-4317-z

European Spine Journal, 25(9):3004-3005, 2016

JCR Impact Factor: 2.563 (2016) -- Best Category: 18/76 orthopedics -- Quartile: 1

Papers in Journals

Blaž Cugmas, Peter Naglič

Obstojnost črnil v vodnih fantomih za uporabo z difuzno reflektančno spektroskopijo

Elektrotehniški vestnik - Electrotechnical Review, 83(3):93-98, 2016

Papers in Journals

Andraž Mehle, Marko Bukovec, Boštjan Likar, Dejan Tomaževič

Print registration for automated visual inspection of transparent pharmaceutical capsules

Machine Vision and Applications, 27(7):1087-1102, 2016

JCR Impact Factor: 1.797 (2016) -- Best Category: 9/22 computer science, cybernetics -- Quartile: 2

Papers in Journals

Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Stratified mixture modeling for segmentation of white-matter lesions in brain MR images

NeuroImage, 124(Part A):1031-1043, 2016

JCR Impact Factor: 5.835 (2016) -- Best Category: 1/14 neuroimaging -- Quartile: 1

Papers in Journals

Žiga Lesjak, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Validation of white-matter lesion change detection methods on a novel publicly available MRI image database

Neuroinformatics, 14(4):403-420, 2016

JCR Impact Factor: 3.200 (2016) -- Best Category: 17/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

A framework for automated spine and vertebrae interpolation-based detection and model-based segmentation

IEEE Transactions on Medical Imaging, 34(8):1649-1662, 2015

JCR Impact Factor: 3.756 (2015) -- Best Category: 13/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Blaž Cugmas, Tanja Plavec, Maksimilijan Bregar, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Detection of canine skin and subcutaneous tumors by visible and near-infrared diffuse reflectance spectroscopy

Journal of Biomedical Optics, 20(3):037003, 2015

JCR Impact Factor: 2.556 (2015) -- Best Category: 21/90 optics -- Quartile: 1

Papers in Journals

Ching-Wei Wang, Cheng-Ta Huang, Meng-Che Hsieh, Chung-Hsing Li, Sheng-Wei Chang, Wei-Cheng Li, Rémy Vandaele, Raphaël Marée, Sébastien Jodogne, Pierre Geurts, Cheng Chen, Guoyan Zheng, Chengwen Chu, Hengameh Mirzaalian, Ghassan Hamarneh, Tomaž Vrtovec, Bulat Ibragimov

Evaluation and comparison of anatomical landmark detection methods for cephalometric X-ray images: a grand challenge

IEEE Transactions on Medical Imaging, 34(9):1890-1900, 2015

JCR Impact Factor: 3.756 (2015) -- Best Category: 13/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Limitations of the commonly used simplified laterally uniform optical fiber probe-tissue interface in Monte Carlo simulations of diffuse reflectance

Biomedical Optics Express, 6(10):3973-3988, 2015

JCR Impact Factor: 3.344 (2015) -- Best Category: 12/90 optics -- Quartile: 1

Papers in Journals

David Martinčič, Miha Brojan, Franc Kosel, Darko Štern, Tomaž Vrtovec, Rok Vengust

Minimum cement volume for vertebroplasty

International Orthopaedics, 39(4):727-733, 2015

JCR Impact Factor: 2.387 (2015) -- Best Category: 19/74 orthopedics -- Quartile: 2

Papers in Journals

Maksimilijan Bregar, Blaž Cugmas, Peter Naglič, Daniela Hartmann, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Properties of contact pressure induced by manually operated fiber-optic probes

Journal of Biomedical Optics, 20(12):127002, 2015

JCR Impact Factor: 2.556 (2015) -- Best Category: 21/90 optics -- Quartile: 1

Papers in Journals

Blaž Bratanič, Franjo Pernuš, Boštjan Likar, Dejan Tomaževič

Real-time pose estimation of rigid objects in heavily cluttered environments

Computer Vision and Image Understanding, 141:38-51, 2015

JCR Impact Factor: 2.134 (2015) -- Best Category: 62/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Robust estimation of unbalanced mixture models on samples with outliers

IEEE Transactions on Pattern Analysis and Machine Intelligence, 37(11):2273-2285, 2015

JCR Impact Factor: 6.077 (2015) -- Best Category: 5/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Bulat Ibragimov, Jerry L. Prince, Emi Z. Murano, Jonghye Woo, Maureen Stone, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of tongue muscles from super-resolution magnetic resonance images

Medical Image Analysis, 20(1):198-207, 2015

JCR Impact Factor: 4.565 (2015) -- Best Category: 4/104 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Uroš Mitrović, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Simultaneous 3D–2D image registration and C-arm calibration: application to endovascular image-guided interventions

Medical Physics, 42(11):6433-6447, 2015

JCR Impact Factor: 2.496 (2015) -- Best Category: 41/124 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Variability of manual and computerized methods for measuring coronal vertebral inclination in computed tomography images

Image Analysis & Stereology, 34(3):199-208, 2015

JCR Impact Factor: 0.500 (2015) -- Best Category: 210/254 mathematics, applied -- Quartile: 4

Papers in Journals

Žiga Špiclin

Vrednotenje mer podobnosti med strukturnimi tenzorji za poravnavo 3D in 2D slik

Elektrotehniški vestnik - Electrotechnical Review, 82(1-2):66-72, 2015

Papers in Journals

Maksimilijan Bregar, Miran Bürmen, Uroš Aljančič, Blaž Cugmas, Franjo Pernuš, Boštjan Likar

Contact pressure-aided spectroscopy

Journal of Biomedical Optics, 19(2):020501, 2014

JCR Impact Factor: 2.859 (2014) -- Best Category: 13/87 optics -- Quartile: 1

Papers in Journals

Tom P.C. Schlösser, Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Max A. Viergever, Koen L. Vincken, René M. Castelein

Evolution of the ischio-iliac lordosis during natural growth and its relation with the pelvic incidence

European Spine Journal, 23(7):1433-1441, 2014

JCR Impact Factor: 2.066 (2014) -- Best Category: 23/72 orthopedics -- Quartile: 1

Papers in Journals

Blaž Cugmas, Maksimilijan Bregar, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Impact of contact pressure-induced spectral changes on soft-tissue classification in diffuse reflectance spectroscopy: problems and solutions

Journal of Biomedical Optics, 19(3):037002, 2014

JCR Impact Factor: 2.859 (2014) -- Best Category: 13/87 optics -- Quartile: 1

Papers in Journals

Nika Oman Kadunc, Rok Šibanc, Rok Dreu, Boštjan Likar, Dejan Tomaževič

In-line monitoring of pellet coating thickness growth by means of visual imaging

International Journal of Pharmaceutics, 470(1-2):8-14, 2014

JCR Impact Factor: 3.650 (2014) -- Best Category: 56/255 pharmacology & pharmacy -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Investigation of the reproducibility and reliability of sagittal vertebral inclination measurements from MR images of the spine

Computerized Medical Imaging and Graphics, 38(7):620-627, 2014

JCR Impact Factor: 1.218 (2014) -- Best Category: 53/76 engineering, biomedical -- Quartile: 3

Papers in Journals

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Near-infrared hyperspectral imaging of water evaporation dynamics for early detection of incipient caries

Journal of Dentistry, 42(10):1242-1247, 2014

JCR Impact Factor: 2.749 (2014) -- Best Category: 13/88 dentistry, oral surgery & medicine -- Quartile: 1

Papers in Journals

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Parametric modeling of the intervertebral disc space in 3D: application to CT images of the lumbar spine

Computerized Medical Imaging and Graphics, 38(7):596-605, 2014

JCR Impact Factor: 1.218 (2014) -- Best Category: 53/76 engineering, biomedical -- Quartile: 3

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Push-broom hyperspectral image calibration and enhancement by 2D deconvolution with a variant response function estimate

Optics Express, 22(22):27655-27668, 2014

JCR Impact Factor: 3.488 (2014) -- Best Category: 10/87 optics -- Quartile: 1

Papers in Journals

Blaž Bratanič, Franjo Pernuš, Boštjan Likar, Dejan Tomaževič

Real-time rotation estimation using histograms of oriented gradients

PLOS One, 9(3):e92137, 2014

JCR Impact Factor: 3.234 (2014) -- Best Category: 9/57 multidisciplinary sciences -- Quartile: 1

Papers in Journals

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Shape representation for efficient landmark-based segmentation in 3D

IEEE Transactions on Medical Imaging, 33(4):861-874, 2014

JCR Impact Factor: 3.390 (2014) -- Best Category: 18/249 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Blaž Cugmas, Miran Bürmen, Jurij Jemec, Franjo Pernuš, Boštjan Likar

Towards automated detection of milk spot livers by diffuse reflectance spectroscopy

Journal of Food Engineering, 124:128-132, 2014

JCR Impact Factor: 2.771 (2014) -- Best Category: 19/123 food science & technology -- Quartile: 1

Papers in Journals

Uroš Mitrović, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

3D-2D registration of cerebral angiograms: a method and evaluation on clinical images

IEEE Transactions on Medical Imaging, 32(8):1550-1563, 2013

JCR Impact Factor: 3.799 (2013) -- Best Category: 16/247 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

A method for characterizing illumination systems for hyperspectral imaging

Optics Express, 21(4):4841-4853, 2013

JCR Impact Factor: 3.525 (2013) -- Best Category: 6/83 optics -- Quartile: 1

Papers in Journals

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automated visual inspection of imprint quality of pharmaceutical tablets

Machine Vision and Applications, 24(1):66-73, 2013

JCR Impact Factor: 1.444 (2013) -- Best Category: 9/24 computer science, cybernetics -- Quartile: 2

Papers in Journals

Matjaž Kosec, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Characterization of a spectrograph based hyperspectral imaging system

Optics Express, 21(10):12085-12099, 2013

JCR Impact Factor: 3.525 (2013) -- Best Category: 6/83 optics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Boštjan Likar, René M. Castelein, Max A. Viergever, Franjo Pernuš

Evaluation of pelvic morphology in the sagittal plane

The Spine Journal, 13(11):1500-1509, 2013

JCR Impact Factor: 2.800 (2013) -- Best Category: 11/67 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Manual and computerized measurement of coronal vertebral inclination on MRI images: a pilot study

Clinical Radiology, 68(8):807-814, 2013

JCR Impact Factor: 1.663 (2013) -- Best Category: 63/121 radiology, nuclear medicine & medical imaging -- Quartile: 3

Papers in Journals

Blaž Cugmas, Miran Bürmen, Maksimilijan Bregar, Franjo Pernuš, Boštjan Likar

Pressure-induced near infrared spectra response as a valuable source of information for soft tissue classification

Journal of Biomedical Optics, 18(4):047002, 2013

JCR Impact Factor: 2.752 (2013) -- Best Category: 17/83 optics -- Quartile: 1

Papers in Journals

Darko Štern, Vesna Njagulj, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Quantitative vertebral morphometry based on parametric modeling of vertebral bodies in 3D

Osteoporosis International, 24(4):1357-1368, 2013

JCR Impact Factor: 4.165 (2013) -- Best Category: 30/123 endocrinology & metabolism -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Radiometric calibration and noise estimation of acousto-optic tunable filter hyperspectral imaging systems

Applied Optics, 52(15):3526-3537, 2013

JCR Impact Factor: 1.649 (2013) -- Best Category: 29/83 optics -- Quartile: 2

Papers in Journals

Michiel M.A. Janssen, Koen L. Vincken, Sjoerd M. van Raak, Tomaž Vrtovec, Bastiaan Kemp, Max A. Viergever, Lambertus W. Bartels, René M. Castelein

Sagittal spinal profile and spinopelvic balance in parents of scoliotic children

The Spine Journal, 13(12):1789-1800, 2013

JCR Impact Factor: 2.800 (2013) -- Best Category: 11/67 orthopedics -- Quartile: 1

Papers in Journals

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

A game-theoretic framework for landmark-based image segmentation

IEEE Transactions on Medical Imaging, 31(9):1761-1776, 2012

JCR Impact Factor: 4.027 (2012) -- Best Category: 8/242 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Primož Markelj, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

A review of 3D/2D registration methods for image-guided interventions

Medical Image Analysis, 16(3):642-661, 2012

JCR Impact Factor: 4.087 (2012) -- Best Category: 4/99 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Boštjan Likar, René M. Castelein, Max A. Viergever, Franjo Pernuš

A review of methods for evaluating the quantitative parameters of sagittal pelvic alignment

The Spine Journal, 12(5):433-446, 2012

JCR Impact Factor: 3.355 (2012) -- Best Category: 3/63 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M. A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Analysis of pelvic incidence from three-dimensional images of a normal population

Spine, 37(8):E479-E485, 2012

JCR Impact Factor: 2.159 (2012) -- Best Category: 17/63 orthopedics -- Quartile: 2

Papers in Journals

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Automated classification and visualization of healthy and diseased hard dental tissues by near-infrared hyperspectral imaging

Applied Spectroscopy, 66(9):1067-1074, 2012

JCR Impact Factor: 1.942 (2012) -- Best Category: 10/57 instruments & instrumentation -- Quartile: 1

Papers in Journals

Matjaž Kosec, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automated model-based calibration of short-wavelength infrared (SWIR) imaging spectrographs

Applied Spectroscopy, 66(10):1128-1135, 2012

JCR Impact Factor: 1.942 (2012) -- Best Category: 10/57 instruments & instrumentation -- Quartile: 1

Papers in Journals

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Groupwise registration of multi-modal images by an efficient joint entropy minimization scheme

IEEE Transactions on Image Processing, 21(5):2546-2558, 2012

JCR Impact Factor: 3.199 (2012) -- Best Category: 17/242 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Multi-feature mutual information image registration

Image Analysis & Stereology, 31(1):43-53, 2012

JCR Impact Factor: 0.639 (2012) -- Best Category: 14/23 imaging science & photographic technology -- Quartile: 3

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Pelvic incidence: analysis in three dimensions

Journal of Bone and Joint Surgery, British Volume, 94-B(suppl. XLIV):107, 2012

JCR Impact Factor: 2.689 (2012) -- Best Category: 31/198 surgery -- Quartile: 1

Papers in Journals

Peter Usenik, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Automated tracking and analysis of phospholipid vesicle contours in phase contrast microscopy images

Medical & Biological Engineering & Computing, 49(8):957-966, 2011

JCR Impact Factor: 1.878 (2011) -- Best Category: 25/99 computer science, interdisciplinary applications -- Quartile: 2

Papers in Journals

Žiga Špiclin, Marko Bukovec, Franjo Pernuš, Boštjan Likar

Image registration for visual inspection of imprinted pharmaceutical tablets

Machine Vision and Applications, 22(1):197-206, 2011

JCR Impact Factor: 1.009 (2011) -- Best Category: 125/244 engineering, electrical & electronic -- Quartile: 3

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Manual and computerized measurement of sagittal vertebral inclination in computed tomography images

Spine, 36(13):E875-E881, 2011

JCR Impact Factor: 2.078 (2011) -- Best Category: 20/63 orthopedics -- Quartile: 2

Papers in Journals

Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Parametric modelling and segmentation of vertebral bodies in 3D CT and MR spine images

Physics in Medicine and Biology, 56(23):7505-7522, 2011

JCR Impact Factor: 2.829 (2011) -- Best Category: 14/72 engineering, biomedical -- Quartile: 1

Papers in Journals

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Real-time image segmentation for visual inspection of pharmaceutical tablets

Machine Vision and Applications, 22(1):145-156, 2011

JCR Impact Factor: 1.009 (2011) -- Best Category: 125/244 engineering, electrical & electronic -- Quartile: 3

Papers in Journals

Marko Bukovec, Boštjan Likar, Franjo Pernuš

Segmentation of anatomical structures by connected statistical models

Image Analysis & Stereology, 30(2):77-88, 2011

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Spectral characterization of near-infrared acousto-optic tunable filter (AOTF) hyperspectral imaging systems using standard calibration materials

Applied Spectroscopy, 65(4):393-401, 2011

JCR Impact Factor: 1.663 (2011) -- Best Category: 15/58 instruments & instrumentation -- Quartile: 2

Papers in Journals

Supriyanto Pawiro, Primož Markelj, Franjo Pernuš, Christelle Gendrin, Michael Figl, Christoph Weber, Franz Kainberger, Iris Nöbauer-Huhmann, Helga Bergmeister, Markus Stock, Dietmar Georg, Helmar Bergmann, Wolfgang Birkfellner

Validation for 2D/3D registration I: a new gold standard data set

Medical Physics, 38(3):1481 (10), 2011

JCR Impact Factor: 2.830 (2011) -- Best Category: 29/116 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Christelle Gendrin, Primož Markelj, Supriyanto Pawiro, Jakob Spoerk, Christoph Bloch, Christoph Weber, Michael Figl, Helmar Bergmann, Wolfgang Birkfellner, Boštjan Likar, Franjo Pernuš

Validation for 2D/3D registration II: the comparison of intensity- and gradient-based merit functions using a new gold standard data set

Medical Physics, 38(3):1491 (12), 2011

JCR Impact Factor: 2.830 (2011) -- Best Category: 29/116 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

A survey of mobile robots for distribution power line inspection

IEEE Transactions on Power Delivery, 25(1):485-493, 2010

JCR Impact Factor: 1.208 (2010) -- Best Category: 101/247 engineering, electrical & electronic -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Rok Vengust, Boštjan Likar, Franjo Pernuš

Analysis of four manual and a computerized method for measuring axial vertebral rotation in computed tomography images

Spine, 35(12):E535-E541, 2010

JCR Impact Factor: 2.510 (2010) -- Best Category: 10/61 orthopedics -- Quartile: 1

Papers in Journals

Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated detection of spinal centrelines, vertebral bodies and intervertebral discs in CT and MR images of lumbar spine

Physics in Medicine and Biology, 55(1):247-264, 2010

JCR Impact Factor: 3.056 (2010) -- Best Category: 11/69 engineering, biomedical -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Deconvolution in AOTF spectrometry

Applied Spectroscopy, 64(11):1265-1273, 2010

JCR Impact Factor: 1.729 (2010) -- Best Category: 15/61 instruments & instrumentation -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Determination of axial vertebral rotation in MR images: comparison of four manual and a computerized method

European Spine Journal, 19(5):774-781, 2010

JCR Impact Factor: 1.994 (2010) -- Best Category: 20/61 orthopedics -- Quartile: 2

Papers in Journals

Miha Možina, Dejan Tomaževič, Stanko Leben, Franjo Pernuš, Boštjan Likar

Digital imaging as a process analytical technology tool for fluid-bed pellet coating process

European Journal of Pharmaceutical Sciences, 41(1):156-162, 2010

JCR Impact Factor: 3.291 (2010) -- Best Category: 68/249 pharmacology & pharmacy -- Quartile: 2

Papers in Journals

Michael Figl, Christoph Bloch, Christelle Gendrin, Christoph Weber, Supriyanto Pawiro, Johann Hummel, Primož Markelj, Franjo Pernuš, Helmar Bergmann, Wolfgang Birkfellner

Efficient implementation of the rank correlation merit function for 2D/3D registration

Physics in Medicine and Biology, 55(19):N465-N471, 2010

JCR Impact Factor: 3.056 (2010) -- Best Category: 11/69 engineering, biomedical -- Quartile: 1

Papers in Journals

Žiga Špiclin, Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Geometric calibration of a hyperspectral imaging system

Applied Optics, 49(15):2813–2818, 2010

JCR Impact Factor: 1.703 (2010) -- Best Category: 30/70 optics -- Quartile: 2

Papers in Journals

Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Spectral characterization and calibration of AOTF spectrometers and hyper-spectral imaging systems

Chemometrics and Intelligent Laboratory Systems, 101(1):23-29, 2010

JCR Impact Factor: 2.222 (2010) -- Best Category: 7/92 mathematics, interdisciplinary applications -- Quartile: 1

Papers in Journals

Primož Markelj, Boštjan Likar, Franjo Pernuš

Standardized evaluation methodology for 3D/2D registration based on the Visible Human data set

Medical Physics, 37(9):4643-4647, 2010

JCR Impact Factor: 3.070 (2010) -- Best Category: 27/111 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

A review of methods for quantitative evaluation of axial vertebral rotation

European Spine Journal, 18(8):1079-1090, 2009

JCR Impact Factor: 1.956 (2009) -- Best Category: 14/56 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

A review of methods for quantitative evaluation of spinal curvature

European Spine Journal, 18(5):593-607, 2009

JCR Impact Factor: 1.956 (2009) -- Best Category: 14/56 orthopedics -- Quartile: 1

Papers in Journals

Aleš Fidler, Boštjan Likar

Constant compression ratio does not assure image detail preservation

Caries Research, 43(1):81-82, 2009

JCR Impact Factor: 2.462 (2009) -- Best Category: 8/64 dentistry, oral surgery and medicine -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

High-speed precision weighing of pharmaceutical capsules

Measurement Science and Technology, 20(11):115203, 2009

JCR Impact Factor: 1.317 (2009) -- Best Category: 47/192 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Darko Škerl, Boštjan Likar, Franjo Pernuš

A protocol for evaluation of similarity measures for non-rigid registration

Medical Image Analysis, 12(1):42-54, 2008

JCR Impact Factor: 3.602 (2008) -- Best Category: 4/98 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

LED light sources: a survey of quality-affecting factors and methods for their assessment

Measurement Science and Technology, 19(12):122002, 2008

JCR Impact Factor: 1.493 (2008) -- Best Category: 28/176 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Quantitative analysis of spinal curvature in 3D: application to CT images of normal spine

Physics in Medicine and Biology, 53(7):1895-1908, 2008

JCR Impact Factor: 2.784 (2008) -- Best Category: 10/51 engineering, biomedical -- Quartile: 1

Papers in Journals

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Robust 3-D/2-D registration of CT and MR to X-ray images based on gradient reconstruction

International Journal of Computer Assisted Radiology and Surgery, 3(6):477-484, 2008

JCR Impact Factor: 1.481 (2011) -- Best Category: 89/199 surgery -- Quartile: 2

Papers in Journals

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Robust gradient-based 3-D/2-D registration of CT and MR to X-ray images

IEEE Transactions on Medical Imaging, 27(12):1704-1714, 2008

JCR Impact Factor: 4.004 (2008) -- Best Category: 1/98 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Boštjan Likar, Josien P.W. Pluim

The Third International Workshop on Biomedical Image Registration – WBIR 2006 (Editorial)

Medical Image Analysis, 12(1):1-2, 2008

JCR Impact Factor: 3.602 (2008) -- Best Category: 4/98 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

A review of methods for correction of intensity inhomogeneity in MRI

IEEE Transactions on Medical Imaging, 26(3):405-421, 2007

JCR Impact Factor: 3.275 (2007) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Accelerated estimation of spectral degradation of white GaN-based LEDs

Measurement Science and Technology, 18(1):230-238, 2007

JCR Impact Factor: 1.297 (2007) -- Best Category: 10/67 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Sébastien Ourselin, Lavier Gomes, Boštjan Likar, Franjo Pernuš

Automated generation of curved planar reformations from MR images of the spine

Physics in Medicine and Biology, 52(10):2865-2878, 2007

JCR Impact Factor: 2.528 (2007) -- Best Category: 9/44 engineering, biomedical -- Quartile: 1

Papers in Journals

Marko Bukovec, Žiga Špiclin, Franjo Pernuš, Boštjan Likar

Automated visual inspection of imprinted pharmaceutical tablets

Measurement Science and Technology, 18(9):2921-2930, 2007

JCR Impact Factor: 1.297 (2007) -- Best Category: 10/67 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Darko Škerl, Boštjan Likar, Michael J. Fitzpatrick, Franjo Pernuš

Comparative evaluation of similarity measures for the rigid registration of multi-modal head images

Physics in Medicine and Biology, 52(18):5587-5601, 2007

JCR Impact Factor: 2.528 (2007) -- Best Category: 9/44 engineering, biomedical -- Quartile: 1

Papers in Journals

Aleš Fidler, Uroš Skalerič, Boštjan Likar

The effect of image content on detail preservation and file size reduction in lossy compression

Dentomaxillofacial Radiology, 36(7):387-392, 2007

JCR Impact Factor: 0.899 (2007) -- Best Category: 74/87 radiology, nuclear medicine & medical imaging -- Quartile: 4

Papers in Journals

Aleš Fidler, Boštjan Likar, Helmut R. Ringl

What is wrong with compression ratio in lossy image compression?

Radiology, 245(1):299-300, 2007

JCR Impact Factor: 5.561 (2007) -- Best Category: 3/87 radiology, nuclear medicine and medical imaging -- Quartile: 1

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

3-D/2-D registration by integrating 2-D information in 3-D

IEEE Transactions on Medical Imaging, 25(1):17-27, 2006

JCR Impact Factor: 3.757 (2006) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Darko Škerl, Boštjan Likar, Franjo Pernuš

A protocol for evaluation of similarity measures for rigid registration

IEEE Transactions on Medical Imaging, 25(6):779-791, 2006

JCR Impact Factor: 3.757 (2006) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Automated optical quality inspection of light emitting diodes

Measurement Science and Technology, 17(6):1372-1378, 2006

JCR Impact Factor: 1.228 (2006) -- Best Category: 12/66 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Darko Škerl, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Evaluation of similarity measures for reconstruction-based registration in image-guided radiotherapy and surgery

International Journal of Radiation Oncology*Biology*Physics, 65(3):943-953, 2006

JCR Impact Factor: 4.463 (2006) -- Best Category: 7/85 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Intensity inhomogeneity correction of multispectral MR images

NeuroImage, 32(1):54-61, 2006

JCR Impact Factor: 5.559 (2006) -- Best Category: 1/13 neuroimaging -- Quartile: 1

Papers in Journals

Aleš Fidler, Boštjan Likar, Uroš Skalerič

Lossy JPEG compression: easy to compress, hard to compare

Dentomaxillofacial Radiology, 35(2):67-73, 2006

JCR Impact Factor: 0.821 (2006) -- Best Category: 128/182 surgery -- Quartile: 3

Papers in Journals

Klemen Bohinc, Darko Lombardo, Veronika Kralj-Iglič, Miha Fošnarič, Sylvio May, Franjo Pernuš, Henry Hägerstrand, Aleš Iglič

Shape variation of bilayer membrane daughter vesicles induced by anisotropic membrane inclusions

Cellular and Molecular Biology Letters, 11(1):90-101, 2006

Papers in Journals

Aleš Fidler, Uroš Skalerič, Boštjan Likar

The impact of image information on compressibility and degradation in medical image compression

Medical Physics, 33(8):2832-2838, 2006

JCR Impact Factor: 3.571 (2006) -- Best Category: 13/85 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Automated curved planar reformation of 3D spine images

Physics in Medicine and Biology, 50(19):4527-4540, 2005

JCR Impact Factor: 2.683 (2005) -- Best Category: 6/41 engineering, biomedical -- Quartile: 1

Papers in Journals

Tomaž Vrtovec

Curved planar reformation of CT spine images

Elektrotehniški vestnik - Electrotechnical Review, 72:285-290, 2005

Papers in Journals

Everine B. van de Kraats, Greame P. Penney, Dejan Tomaževič, Theo van Walsum, Wiro J. Niessen

Standardized evaluation methodology for 2-D-3-D registration

IEEE Transactions on Medical Imaging, 24(9):1177-1189, 2005

JCR Impact Factor: 3.939 (2005) -- Best Category: 1/12 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Dejan Tomaževič, Boštjan Likar, Ludvik Travnik, Franjo Pernuš

Automated construction of 3D statistical shape models

Image Analysis & Stereology, 23(2):111-120, 2004

Papers in Journals

Uroš Vovk

Correction of dynamic intensity inhomogeneity in MR images (Odpravljanje dinamičnih svetlostnih nehomogenosti v MR slikah)

Elektrotehniški vestnik - Electrotechnical Review, 71:243-248, 2004

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Gold standard data for evaluation and comparison of 3D/2D registration methods

Computer Aided Surgery, 9(4):137-144, 2004

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

MRI intensity inhomogeneity correction by combining intensity and spatial information

Physics in Medicine and Biology, 49(17):4119-4133, 2004

JCR Impact Factor: 2.368 (2004) -- Best Category: 7/42 engineering, biomedical -- Quartile: 1

Papers in Journals

Dejan Stojaković, Rok Bernard, Franjo Pernuš, Boštjan Likar

Zajemanje svetlostno homogene in barvno kontrastne slike s pomočjo nastavljivega svetila

Elektrotehniški vestnik - Electrotechnical Review, 71:1-6, 2004

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Tomaž Slivnik, Franjo Pernuš

3-D/2-D registration of CT and MR to X-ray images

IEEE Transactions on Medical Imaging, 22(11):1407-1416, 2003

Papers in Journals

Jože Derganc, Boštjan Likar, Franjo Pernuš

A machine vision system for measuring the eccentricity of bearings

Computers in Industry, 50(1):103-111, 2003

Papers in Journals

Jože Derganc, Boštjan Likar, Rok Bernard, Dejan Tomaževič, Franjo Pernuš

Real-time automated visual inspection of color tablets in pharmaceutical blisters

Real-Time Imaging, 9(2):113-124, 2003

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Comparative evaluation of JPEG and JPEG2000 compression in quantitative digital subtraction radiography

Dentomaxillofacial Radiology, 31(6):371-384, 2002

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Comparative evaluation of retrospective shading correction methods

Journal of Microscopy, 208(3):212-223, 2002

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Impact of JPEG lossy image compression on quantitative digital subtraction radiography

Dentomaxillofacial Radiology, 31(2):106-112, 2002

Papers in Journals

Franci Lahajnar, Rok Bernard, Franjo Pernuš, Stansilav Kovačič

Machine vision system for inspecting electric plates

Computers in Industry, 47(1):113-122, 2002

Papers in Journals

Boštjan Likar, Franjo Pernuš

A hierarchical approach to elastic registration based on mutual information

Image and Vision Computing, 19(1-2):33-44, 2001

Papers in Journals

Rok Bernard, Maša Kandušer, Franjo Pernuš

Model-based automated detection of mammalian cell colonies

Physics in Medicine and Biology, 46(11):3061-3072, 2001

Papers in Journals

Boštjan Likar, Max A. Viergever, Franjo Pernuš

Retrospective correction of MR intensity inhomogeneity by information minimization

IEEE Transactions on Medical Imaging, 20(12):1398-1410, 2001

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Influence of developer exhaustion on accuracy of quantitative digital subtraction radiography: an in vitro study

Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontics, 90(2):233-239, 2000

Papers in Journals

Boštjan Likar, J.B. Antoine Maintz, Max A. Viergever, Franjo Pernuš

Retrospective shading correction based on entropy minimization

Journal of Microscopy, 197(3):285-295, 2000

Papers in Journals

Rok Vengust, Matej Drobnik, Matej Daniel, Vane Antolič, Franjo Pernuš, Aleš Iglič, Veronika Kralj-Iglič

Role of magnification of standard anterior-posterior radiographs in determination of contact hip joint stress: short communication

Fángshí gäongchéng (Journal of Chinese Corrosion Engineering), 12(5):30-32, 2000

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Vpliv dolgotrajnosti razvijalca na natančnost digitalne subtrakcijske radiografije

Zobozdravstveni vestnik, 55:67-72, 2000

Papers in Journals

Boštjan Likar, Franjo Pernuš

Automatic extraction of corresponding points for the registration of medical images

Medical Physics, 26(8):1678-1686, 1999

Papers in Journals

Jože Derganc, Franjo Pernuš

Kontrola kakovosti ležajev električnega števca z računalniškim vidom

Elektrotehniški vestnik - Electrotechnical Review, 66:292-298, 1999

Papers in Journals

Boštjan Likar, Franjo Pernuš

Registration of serial transverse sections of muscle fibers

Cytometry, 37(2):93-106, 1999

Papers in Journals

Aleš Klemenčič, Stansilav Kovačič, Franjo Pernuš

Automated segmentation of muscle fiber images using active contour models

Cytometry, 32(4):317-326, 1998

Papers in Journals

Stanislav Kovačič, Aleš Leonardis, Franjo Pernuš

Planning sequences of views for 3-D object recognition and pose determination

Pattern Recognition, 31(10):1407-1417, 1998

Papers in Journals

Boštjan Likar, Franjo Pernuš

Evaluation of three contrast correction methods for digital subtraction in dental radiography: an in vitro study

Medical Physics, 24(2):299-307, 1997

Papers in Journals

Vita Čebašek, Franjo Pernuš, Slavko Obreza, Marko Ambrož, Ida Eržen

Energy metabolism of fibre types within fascicles of human muscles

Pflügers Archiv - European Journal of Physiology, 431(6 Suppl):R211-R212, 1996

Papers in Journals

Ludvik Travnik, Franjo Pernuš, Ida Eržen

Histochemical and morphometric characteristics of the normal human vastus medialis longus and vastus medialis obliquus muscles

Journal of Anatomy, 187(2):403-411, 1995

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