Publications for 'Franjo Pernuš'

Papers in Journals

Lara Dular, Franjo Pernuš, Žiga Špiclin

Extensive T1-weighted MRI preprocessing improves generalizability of deep brain age prediction models

Computers in Biology and Medicine, 173:108320, 2024

JCR Impact Factor: 7.0 (2023) -- Best Category: 2/65 mathematical & computational biology -- Quartile: 1

Papers in Journals

Žiga Bizjak, June Ho Choi, Wonhyoung Park, Franjo Pernuš, Žiga Špiclin

Deep geometric learning for intracranial aneurysm detection: towards expert rater performance

Journal of Neurointerventional Surgery, 2023

JCR Impact Factor: 4.5 (2023) -- Best Category: 2/15 neuroimaging -- Quartile: 1

Papers in Conference Proceedings

Luka Škrlj, Matija Jelenc, Franjo Pernuš, Tomaž Vrtovec

Zaznavanje oslonilnih točk aortne zaklopke v CT slikah s postopkom globokega učenja

17. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2023, 20. marec, Maribor, Slovenija (B. Potočnik, ur.), 61-68, 2023

Papers in Journals

Miran Bürmen, Franjo Pernuš, Peter Naglič

MCDataset: a public reference dataset of Monte Carlo simulated quantities for multilayered and voxelated tissues computed by massively parallel PyXOpto Python package

Journal of Biomedical Optics, 27(8):083012, 2022

JCR Impact Factor: 3.5 (2022) -- Best Category: 38/135 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Peter Naglič, Franjo Pernuš, Miran Bürmen

Reflectance calibration of multimode optical fiber probes by probe-to-target distance reflectance profile modeling

Measurement, 203:112002, 2022

JCR Impact Factor: 5.6 (2022) -- Best Category: 9/63 instruments & instrumentation -- Quartile: 1

Papers in Conference Proceedings

Žan Cimperman, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Autofocus algorithms for lensless on-chip microscopy validated on synthetic targets for microfluidic applications and particle tracking

SPIE Photonics Europe 2022: Unconventional Optical Imaging III, Apr 3-7, Strasbourg, France (M. P. Georges, G. Popescu, N. Verrier, Eds.), 12136:1213617, 2022

Papers in Journals

Žiga Bizjak, Franjo Pernuš, Žiga Špiclin

Deep shape features for predicting future intracranial aneurysm growth

Frontiers in Physiology, 12:644349, 2021

JCR Impact Factor: 4.755 (2021) -- Best Category: 20/81 physiology -- Quartile: 1

Papers in Conference Proceedings

Yevhen Zelinskyi, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Efficient Monte Carlo simulations of subdiffusive reflectance for spatial frequency domain imaging systems with a low NA

SPIE European Conference on Biomedical Optics 2021: Diffuse Optical Spectroscopy and Imaging VIII, Jun 20-24, Munich, Germany (D. Contini, Y. Hoshi, T. D. O'Sullivan, Eds.), 11920:119201U, 2021

Papers in Conference Proceedings

Žiga Bizjak, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Modality agnostic intracranial aneurysm detection through supervised vascular surface classification

SPIE Medical Imaging 2021: Computer-Aided Diagnosis, Feb 15-20 (A. M. Mazurowski, K. Drukker, Eds.), 11597:115970O, 2021

Papers in Conference Proceedings

Peter Naglič, Yevhen Zelinskyi, Franjo Pernuš, Boštjan Likar, Miran Bürmen

pyxopto: an open-source Python library with utilities for fast light propagation modeling in turbid media

SPIE European Conference on Biomedical Optics 2021: Diffuse Optical Spectroscopy and Imaging VIII, Jun 20-24, Munich, Germany (D. Contini, Y. Hoshi, T. D. O'Sullivan, Eds.), 11920:1192012, 2021

Papers in Journals

Tomaž Vrtovec, Domen Močnik, Primož Strojan, Franjo Pernuš, Bulat Ibragimov

Auto-segmentation of organs at risk for head and neck radiotherapy planning: from atlas-based to deep learning methods

Medical Physics, 47(9):e929-e950, 2020

JCR Impact Factor: 4.071 (2020) -- Best Category: 27/186 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Tim Jerman, Aichi Chien, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Automated cutting plane positioning for intracranial aneurysm quantification

IEEE Transactions on Biomedical Engineering, 67(2):577-587, 2020

JCR Impact Factor: 4.538 (2020) -- Best Category: 24/90 engineering, biomedical -- Quartile: 2

Papers in Journals

Hennadii Madan, Rok Berlot, Nicola J. Ray, Franjo Pernuš, Žiga Špiclin

Practical priors for Bayesian inference of latent biomarkers

IEEE Journal of Biomedical and Health Informatics, 24(2):396-406, 2020

JCR Impact Factor: 5.772 (2020) -- Best Category: 5/58 mathematical & computational biology -- Quartile: 1

Papers in Conference Proceedings

Žiga Bizjak, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Vascular surface segmentation for intracranial aneurysm isolation and quantification

23rd International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, Oct 4-8, Lima, Peru (A. L. Martel et al., Eds.), Lecture Notes in Computer Science 12266:128-137, 2020

Papers in Conference Proceedings

Žiga Bizjak, Tim Jerman, Boštjan Likar, Franjo Pernuš, Aichi Chien, Žiga Špiclin

Registration based detection and quantification of intracranial aneurysm growth

SPIE Medical Imaging 2019: Computer-Aided Diagnosis, Feb 16-21, San Diego, CA, USA (K. Mori, H. K. Hahn, Eds.), 10950:1095007, 2019

Books and Book Chapters

Timur Aksoy, Gozde Unal, Franjo Pernuš, Žiga Špiclin

3D-2D registration of vascular structures

Chapter 10 of the book Vascular and Intravascular Imaging Trends, Analysis, and Challenges, Vol. 1, Stent Applications (IOP Publishing), 1-33, 2019

Papers in Journals

Uroš Mitrović, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

3D–2D registration in endovascular image-guided surgery: evaluation of state-of-the-art methods on cerebral angiograms

International Journal of Computer Assisted Radiology and Surgery, 13(2):193-202, 2018

JCR Impact Factor: 2.155 (2018) -- Best Category: 83/203 surgery -- Quartile: 2

Papers in Journals

Žiga Lesjak, Alfiia Galimzianova, Aleš Koren, Matej Lukin, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

A novel public MR image dataset of multiple sclerosis patients with lesion segmentations based on multi-rater consensus

Neuroinformatics, 16(1):51-63, 2018

JCR Impact Factor: 5.127 (2018) -- Best Category: 9/106 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Matic Ivančič, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Efficient estimation of subdiffusive optical parameters in real time from spatially resolved reflectance by artificial neural networks

Optics Letters, 43(12):2901-2904, 2018

JCR Impact Factor: 3.866 (2018) -- Best Category: 16/95 optics -- Quartile: 1

Papers in Journals

Alfiia Galimzianova, Žiga Lesjak, Daniel L. Rubin, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Locally adaptive magnetic resonance intensity models for unsupervised segmentation of multiple sclerosis lesions

Journal of Medical Imaging, 5(1):011007, 2018

Papers in Journals

Hennadii Madan, Franjo Pernuš, Žiga Špiclin

Reference-free error estimation for multiple measurement methods

Statistical Methods in Medical Research, 28(7):2196-2209, 2018

JCR Impact Factor: 2.388 (2018) -- Best Category: 15/123 statistics & probability -- Quartile: 1

Papers in Journals

Domen Močnik, Bulat Ibragimov, Lei Xing, Primož Strojan, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of parotid glands from registered CT and MR images

Physica Medica, 52:33-41, 2018

JCR Impact Factor: 2.532 (2018) -- Best Category: 53/129 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Dejan Knez, Janez Mohar, Robert J. Cirman, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Variability analysis of manual and computer-assisted preoperative thoracic pedicle screw placement planning

Spine, 43(21):1487-1495, 2018

JCR Impact Factor: 2.903 (2018) -- Best Category: 19/76 orthopedics -- Quartile: 1

Papers in Conference Proceedings

Domen Ravnik, Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Dataset variability leverages white-matter lesion segmentation performance with convolutional neural network

SPIE Medical Imaging 2018: Image Processing, Feb 10-15, Houston, TX, USA (E. D. Angelini, B. A. Landman, Eds.), 10574:105741J, 2018

Papers in Conference Proceedings

Peter Naglič, Matic Ivančič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Portable measurement system for real-time acquisition and analysis of in-vivo spatially resolved reflectance in the subdiffusive regime

SPIE Photonics West 2018: BiOS - Design and Quality for Biomedical Technologies XI, Jan 27 - Feb 1, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 10486:1048618, 2018

Papers in Conference Proceedings

Hennadii Madan, Rok Berlot, Nicola J. Ray, Franjo Pernuš, Žiga Špiclin

Predicting nucleus basalis of Meynert volume from compartmental brain segmentations

1st International Workshop on Predictive Intelligence in Medical Imaging - PRIME 2018, held in conjunction with the 21th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, Sep 16, Granada, Spain (I. Rekik et al., Eds.), Lecture Notes in Computer Science 11121:68-75, 2018

Papers in Conference Proceedings

Peter Naglič, Matic Ivančič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Regression models for real-time estimation of optical and structural sample properties from subdiffusive spatially resolved reflectance

SPIE Photonics West 2018: BiOS - Optical Interactions with Tissue and Cells XXIX, Jan 27 - Feb 1, San Francisco, CA, USA (E. D. Jansen, H. T. Beier, Eds.), 10492:104920Q, 2018

Papers in Conference Proceedings

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of pathological spines in CT images using a two-way CNN and a collision-based model

5th International Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging - MSKI 2017, held in conjunction with the 20th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, Sep 10, Québec City, Canada (B. Glocker et al., Eds.), Lecture Notes in Computer Science 10734:95-107, 2018

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

2D sub-pixel point spread function measurement using a virtual point-like source

International Journal of Computer Vision, 121(3):391-402, 2017

JCR Impact Factor: 11.541 (2017) -- Best Category: 1/132 computer science, artificial intelligence -- Quartile: 1

Papers in Journals

Hennadii Madan, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

A framework for automatic creation of gold-standard rigid 3D-2D registration datasets

International Journal of Computer Assisted Radiology and Surgery, 12(2):263-275, 2017

JCR Impact Factor: 1.961 (2017) -- Best Category: 89/200 surgery -- Quartile: 2

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Adopting higher-order similarity relations for improved estimation of optical properties from subdiffusive reflectance

Optics Letters, 42(7):1357-1360, 2017

JCR Impact Factor: 3.589 (2017) -- Best Category: 14/94 optics -- Quartile: 1

Papers in Journals

Žiga Lesjak, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Določitev optimalnih značilnic za zaznavo sprememb bele možganovine

Elektrotehniški vestnik - Electrotechnical Review, 84(3):85-92, 2017

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Lookup table-based sampling of the phase function for Monte Carlo simulations of light propagation in turbid media

Biomedical Optics Express, 8(3):1895-1910, 2017

JCR Impact Factor: 3.482 (2017) -- Best Category: 15/94 optics -- Quartile: 1

Papers in Journals

Timur Aksoy, Žiga Špiclin, Franjo Pernuš, Gözde Ünal

Monoplane 3D-2D registration of cerebral angiograms based on multi-objective stratified optimization

Physics in Medicine and Biology, 62(24):9377-9394, 2017

JCR Impact Factor: 2.665 (2017) -- Best Category: 27/78 engineering, biomedical -- Quartile: 2

Papers in Journals

Bulat Ibragimov, Robert Korez, Boštjan Likar, Franjo Pernuš, Lei Xing, Tomaž Vrtovec

Segmentation of pathological structures by landmark-assisted deformable models

IEEE Transactions on Medical Imaging, 36(7):1457-1469, 2017

JCR Impact Factor: 6.131 (2017) -- Best Category: 3/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Three-dimensional point spread function measurements of imaging spectrometers

Journal of Optics, 19(9):095002, 2017

JCR Impact Factor: 2.323 (2017) -- Best Category: 35/94 optics -- Quartile: 2

Papers in Journals

Matic Ivančič, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Virtually increased acceptance angle for efficient estimation of spatially resolved reflectance in the subdiffusive regime: a Monte Carlo study

Biomedical Optics Express, 8(11):4872-4886, 2017

JCR Impact Factor: 3.482 (2017) -- Best Category: 15/94 optics -- Quartile: 1

Papers in Conference Proceedings

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Aneurysm detection in 3D cerebral angiograms based on intra-vascular distance mapping and convolutional neural networks

14th IEEE International Symposium on Biomedical Imaging - ISBI 2017, Apr 18-21, Melbourne, Australia (G. Egan, O. Salvado, Eds.), 612-615, 2017

Papers in Conference Proceedings

Hennadii Madan, Franjo Pernuš, Žiga Špiclin

Benchmarking quantitative imaging biomarker measurement methods without a gold standard

20th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, Sep 10-14, Québec City, Canada (M. Descoteaux et al., Eds.), Lecture Notes in Computer Science 10434:763-771, 2017

Papers in Conference Proceedings

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Estimation of optical properties from subdiffusive reflectance beyond the second similarity parameter γ

SPIE European Conference on Biomedical Optics 2017: Diffuse Optical Spectroscopy and Imaging VI, Jun 25-29, Munich, Germany (H. Dehghani, H. Wabnitz, Eds.), 10412:1041205, 2017

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Intervertebral disc segmentation in MR images with 3D convolutional networks

SPIE Medical Imaging 2017: Image Processing, Feb 11-16, Orlando, FL, USA (M. A. Styner, E. D. Angelini, Eds.), 10133:1013306, 2017

Papers in Conference Proceedings

Hennadii Madan, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Regression without truth with Markov chain Monte-Carlo

SPIE Medical Imaging 2017: Image Perception, Observer Performance, and Technology Assessment, Feb 11-16, Orlando, FL, USA (M. A. Kupinski, R. M. Nishikawa, Eds.), 10136:101360K, 2017

Papers in Conference Proceedings

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of pathological spines in CT images using a two-way CNN and a collision-based model

5th Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging - MICCAI-MSKI 2017, Sep 10, Québec City, Canada (B. Glocker et al., Eds.), 91-103, 2017

Papers in Conference Proceedings

Matic Ivančič, Peter Naglič, Boštjan Likar, Franjo Pernuš, Miran Bürmen

The role of numerical aperture in efficient estimation of spatially resolved reflectance by a Monte Carlo light propagation model

SPIE Photonics West 2017: Optical Interactions with Tissue and Cells XXVIII, Jan 28 - Feb 2, San Francisco, CA, USA (E. D. Jansen, H. T. Beier, Eds.), 10062:100621B, 2017

Papers in Journals

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Blob enhancement and visualization for improved intracranial aneurysm detection

IEEE Transactions on Visualization and Computer Graphics, 22(6):1705-1717, 2016

JCR Impact Factor: 2.254 (2016) -- Best Category: 14/106 computer science, sowtware engineering -- Quartile: 1

Papers in Journals

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Computer-assisted screw size and insertion trajectory planning for pedicle screw placement surgery

IEEE Transactions on Medical Imaging, 35(6):1420-1430, 2016

JCR Impact Factor: 3.942 (2016) -- Best Category: 9/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Deconvolution-based restoration of SWIR pushbroom imaging spectrometer images

Optics Express, 24(21):24704-24718, 2016

JCR Impact Factor: 3.307 (2016) -- Best Category: 16/92 optics -- Quartile: 1

Papers in Journals

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Enhancement of vascular structures in 3D and 2D angiographic images

IEEE Transactions on Medical Imaging, 35(9):2107-2118, 2016

JCR Impact Factor: 3.942 (2016) -- Best Category: 9/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Estimation of optical properties by spatially resolved reflectance spectroscopy in the subdiffusive regime

Journal of Biomedical Optics, 21(9):095003, 2016

JCR Impact Factor: 2.530 (2016) -- Best Category: 40/126 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Stratified mixture modeling for segmentation of white-matter lesions in brain MR images

NeuroImage, 124(Part A):1031-1043, 2016

JCR Impact Factor: 5.835 (2016) -- Best Category: 1/14 neuroimaging -- Quartile: 1

Papers in Journals

Žiga Lesjak, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Validation of white-matter lesion change detection methods on a novel publicly available MRI image database

Neuroinformatics, 14(4):403-420, 2016

JCR Impact Factor: 3.200 (2016) -- Best Category: 17/105 computer science, interdisciplinary applications -- Quartile: 1

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Accurate landmark-based segmentation by incorporating landmark misdetections

13th IEEE International Symposium on Biomedical Imaging - ISBI 2016, Apr 12-16, Prague, Czech Republic (J. Kybic, M. Sonka, Eds.), 1072-1075, 2016

Papers in Conference Proceedings

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Along-track calibration of SWIR push-broom hyperspectral imaging system

SPIE Defense + Commercial Sensing 2016: Hyperspectral Imaging Sensors: Innovative Applications and Sensor Standards, Apr 17-21, Baltimore, MD, USA (D. P. Bannon, Ed.), 9860:98600H, 2016

Papers in Conference Proceedings

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated determination of pedicle morphometry in the thoracic spine

13th IEEE International Symposium on Biomedical Imaging - ISBI 2016, Apr 12-16, Prague, Czech Republic (J. Kybic, M. Sonka, Eds.), 664-667, 2016

Papers in Conference Proceedings

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated pedicle screw size and trajectory planning by maximization of fastening strength

3rd International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging - CSI 2015, held in conjunction with the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Oct 5, Munich, Germany (T. Vrtovec et al., Eds.), Lecture Notes in Computer Science 9402:3-13, 2016

Papers in Conference Proceedings

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin, Aichi Chien

Automatic cutting plane identification for computer-aided analysis of intracranial aneurysms

23rd International Conference on Pattern Recognition - ICPR 2016, Dec 4-8, Cancun, Mexico, 1484-1489, 2016

Papers in Conference Proceedings

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Avtomatska metoda načrtovanja velikosti in trajektorije pedikularnih vijakov

11. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2016, 17. marec, Maribor, Slovenija (B. Potočnik, ur.), 55-68, 2016

Papers in Conference Proceedings

Tim Jerman, Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Combining unsupervised and supervised methods for lesion segmentation

1st BrainLes International Workshop, held in conjunction with the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Oct 5, Munich, Germany, Lecture Notes in Computer Science 9556:45-56, 2016

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor

3rd International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging - CSI 2015, held in conjunction with the 18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Oct 5, Munich, Germany (T. Vrtovec et al., Eds.), Lecture Notes in Computer Science 9402:117-124, 2016

Papers in Conference Proceedings

Matic Ivančič, Peter Naglič, Peter Usenik, Aleš Fidler, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Extraction of optical properties from hyperspectral images by Monte Carlo light propagation model

SPIE Photonics West 2016: Optical Interactions with Tissue and Cells XXVII, Tissue Optics and Optical Properties of Tissue III, Feb 13-18, San Francisco, CA, USA (E. D. Jansen, Ed.), 9706:97061A, 2016

Papers in Conference Proceedings

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Extraction of optical properties in the sub-diffuse regime by spatially resolved reflectance spectroscopy

SPIE Photonics West 2016: Optical Interactions with Tissue and Cells XXVII, Tissue Optics and Optical Properties of Tissue IV, Feb 13-18, San Francisco, CA, USA (E. D. Jansen, Ed.), 9706:97061C, 2016

Papers in Conference Proceedings

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Joint detection and segmentation of vertebral bodies in CT images by sparse representation error minimization

SPIE Medical Imaging 2016: Image Processing, Feb 27 - Mar 3, San Diego, CA, USA (M. A. Styner, E. D. Angelini, Eds.), 9784:97842Y, 2016

Papers in Conference Proceedings

Dejan Knez, Janez Mohar, Robert J. Cirman, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Manual and computer-assisted pedicle screw placement plans: a quantitative comparison

4th Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2016, Oct 17, Athens, Greece (J. Yao et al., Eds.), 78-88, 2016

Papers in Conference Proceedings

Dejan Knez, Janez Mohar, Robert J. Cirman, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Manual and computer-assisted pedicle screw placement plans: a quantitative comparison

4th International Workshop and Challenge on Computational Methods and Clinical Applications for Spine Imaging - CSI 2016, held in conjunction with the 19th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2016, Oct 17, Athens, Greece (J. Yao et al., Eds.), Lecture Notes in Computer Science 10182:105-115, 2016

Papers in Conference Proceedings

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Model-based segmentation of vertebral bodies from MR images with 3D CNNs

19th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2016, Oct 17-21, Athens, Greece (S. Ourselin et al., Eds.), Lecture Notes in Computer Science 9901:433-441, 2016

Papers in Conference Proceedings

Dejan Knez, Janez Mohar, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Quantitative comparison between the straight-forward and anatomical insertion technique for pedicle screw placement

SPIE Medical Imaging 2016: Image Processing, Feb 27 - Mar 3, San Diego, CA, USA (M. A. Styner, E. D. Angelini, Eds.), 9784:978439, 2016

Abstracts in Conference Proceedings

Bulat Ibragimov, Franjo Pernuš, Primož Strojan, Lei Xing

TH-CD-206-05: Machine-learning based segmentation of organs at risks for head and neck radiotherapy planning

Medical Physics, 43(6):3883, 2016

JCR Impact Factor: 2.617 (2016) -- Best Category: 37/126 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

A framework for automated spine and vertebrae interpolation-based detection and model-based segmentation

IEEE Transactions on Medical Imaging, 34(8):1649-1662, 2015

JCR Impact Factor: 3.756 (2015) -- Best Category: 13/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Blaž Cugmas, Tanja Plavec, Maksimilijan Bregar, Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Detection of canine skin and subcutaneous tumors by visible and near-infrared diffuse reflectance spectroscopy

Journal of Biomedical Optics, 20(3):037003, 2015

JCR Impact Factor: 2.556 (2015) -- Best Category: 21/90 optics -- Quartile: 1

Papers in Journals

Peter Naglič, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Limitations of the commonly used simplified laterally uniform optical fiber probe-tissue interface in Monte Carlo simulations of diffuse reflectance

Biomedical Optics Express, 6(10):3973-3988, 2015

JCR Impact Factor: 3.344 (2015) -- Best Category: 12/90 optics -- Quartile: 1

Papers in Journals

Maksimilijan Bregar, Blaž Cugmas, Peter Naglič, Daniela Hartmann, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Properties of contact pressure induced by manually operated fiber-optic probes

Journal of Biomedical Optics, 20(12):127002, 2015

JCR Impact Factor: 2.556 (2015) -- Best Category: 21/90 optics -- Quartile: 1

Papers in Journals

Blaž Bratanič, Franjo Pernuš, Boštjan Likar, Dejan Tomaževič

Real-time pose estimation of rigid objects in heavily cluttered environments

Computer Vision and Image Understanding, 141:38-51, 2015

JCR Impact Factor: 2.134 (2015) -- Best Category: 62/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Robust estimation of unbalanced mixture models on samples with outliers

IEEE Transactions on Pattern Analysis and Machine Intelligence, 37(11):2273-2285, 2015

JCR Impact Factor: 6.077 (2015) -- Best Category: 5/255 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Bulat Ibragimov, Jerry L. Prince, Emi Z. Murano, Jonghye Woo, Maureen Stone, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of tongue muscles from super-resolution magnetic resonance images

Medical Image Analysis, 20(1):198-207, 2015

JCR Impact Factor: 4.565 (2015) -- Best Category: 4/104 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Uroš Mitrović, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Simultaneous 3D–2D image registration and C-arm calibration: application to endovascular image-guided interventions

Medical Physics, 42(11):6433-6447, 2015

JCR Impact Factor: 2.496 (2015) -- Best Category: 41/124 radiology, nuclear medicine & medical imaging -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Variability of manual and computerized methods for measuring coronal vertebral inclination in computed tomography images

Image Analysis & Stereology, 34(3):199-208, 2015

JCR Impact Factor: 0.500 (2015) -- Best Category: 210/254 mathematics, applied -- Quartile: 4

Papers in Conference Proceedings

Maksimilijan Bregar, Blaž Cugmas, Franjo Pernuš, Boštjan Likar, Miran Bürmen

A study on the properties of contact pressure induced by manually operated diffuse reflectance fiber optic probes

SPIE Photonics West 2015: Biophotonics (BiOS), Optical Elastography and Tissue Biomechanics II, Feb 7-12, San Francisco, CA, USA (K. V. Larin, D. D. Sampson, Eds.), 9327:932717-1-6, 2015

Papers in Conference Proceedings

Peter Naglič, Maksimilijan Bregar, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Accuracy of experimental data and Monte Carlo simulation lookup table-based inverse models for assessment of turbid media optical properties with diffuse reflectance spectroscopy

SPIE Photonics West 2015: Biophotonics (BiOS), Biomedical Applications of Light Scattering IX, Feb 7-12, San Francisco, CA, USA (A. Wax, V. Backman, Eds.), 9333:933310-1-9, 2015

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2014, held in conjunction with the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), Lecture Notes in Computational Vision and Biomechanics 20:85-94, 2015

Papers in Conference Proceedings

Dejan Knez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated pedicle screw size and trajectory planning by maximization of fastening strength

3rd Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2015, Oct 5, Munich, Germany (T. Vrtovec et al., Eds.), 3-13, 2015

Papers in Conference Proceedings

Gregor Podrekar, Blaž Bratanič, Boštjan Likar, Franjo Pernuš, Dejan Tomaževič

Automated visual inspection of pharmaceutical tablets in heavily cluttered dynamic environments

14th IAPR International Conference on Machine Vision Applications - MVA 2015, May 18-22, Tokyo, Japan, 206-209, 2015

Papers in Conference Proceedings

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Beyond Frangi: an improved multiscale vesselness filter

SPIE Medical Imaging 2015: Image Processing, Feb 21-26, Orlando, FL, USA (S. Ourselin, M. A. Styner, Eds.), 9413:94132A-1-11, 2015

Papers in Conference Proceedings

Tim Jerman, Alfiia Galimzianova, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Combining unsupervised and supervised methods for lesion segmentation

1st Brain Lesions Workshop - MICCAI-Brainles 2015, Oct 5, Munich, Germany, 28-35, 2015

Papers in Conference Proceedings

Tim Jerman, Franjo Pernuš, Boštjan Likar, Žiga Špiclin

Computer-aided detection and quantification of intracranial aneurysms

18th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2015, Oct 5-9, Munich, Germany (N. Navab et al., Eds.), Lecture Notes in Computer Science 9350:3-10, 2015

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Deformable model-based segmentation of intervertebral discs from MR spine images by using the SSC descriptor

3rd Workshop & Challenge on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2015, Oct 5, Munich, Germany (T. Vrtovec et al., Eds.), 111-118, 2015

Papers in Conference Proceedings

Hennadii Madan, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Device and methods for gold standard registration of clinical 3D and 2D cerebral angiograms

SPIE Medical Imaging 2015: Image-Guided Procedures, Feb 21-26, Orlando, FL, USA (Z. R. Yaniv, R. J. Webster III, Eds.), 9415:94151G-1-10, 2015

Papers in Conference Proceedings

Bulat Ibragimov, Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Interpolation-based detection of lumbar vertebrae in CT spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2014, held in conjunction with the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), Lecture Notes in Computational Vision and Biomechanics 20:73-84, 2015

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2014, held in conjunction with the 17th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), Lecture Notes in Computational Vision and Biomechanics 20:235-240, 2015

Papers in Conference Proceedings

Alfiia Galimzianova, Žiga Lesjak, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Locally-adaptive MR intensity models and MRF-based segmentation of multiple sclerosis lesions

SPIE Medical Imaging 2015: Image Processing, Feb 21-26, Orlando, FL, USA (S. Ourselin, M. A. Styner, Eds.), 9413:94133G-1-9, 2015

Papers in Conference Proceedings

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

On the response function separability of hyperspectral imaging systems

SPIE Security + Defense 2015: Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XXI, Apr 20-24, Baltimore, MD, USA (M. Velez-Reyes, F. A. Kruse, Eds.), 9472:94721N, 2015

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Optimal reinforcement of training dataset in supervised landmark-based segmentation

SPIE Medical Imaging 2015: Image Processing, Feb 21-26, Orlando, FL, USA (S. Ourselin, M. A. Styner, Eds.), 9413:94132K-1-6, 2015

Papers in Conference Proceedings

Blaž Bratanič, Boštjan Likar, Franjo Pernuš, Dejan Tomaževič

Pose estimation of textureless objects in cluttered environments

14th IAPR International Conference on Machine Vision Applications - MVA 2015, May 18-22, Tokyo, Japan, 134-137, 2015

Abstracts in Conference Proceedings

Žiga Lesjak, Alfiia Galimzianova, Boštjan Likar, Franjo Pernuš, Žiga Špiclin

Increased accuracy and reproducibility of MS lesion volume quantification by using publicly available BrainSeg3D image analysis software

Multiple Sclerosis Journal, 21(Suppl. 11):500-501, 2015

JCR Impact Factor: 4.671 (2015) -- Best Category: 27/192 clinical neurology -- Quartile: 1

Papers in Journals

Maksimilijan Bregar, Miran Bürmen, Uroš Aljančič, Blaž Cugmas, Franjo Pernuš, Boštjan Likar

Contact pressure-aided spectroscopy

Journal of Biomedical Optics, 19(2):020501, 2014

JCR Impact Factor: 2.859 (2014) -- Best Category: 13/87 optics -- Quartile: 1

Papers in Journals

Tom P.C. Schlösser, Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Max A. Viergever, Koen L. Vincken, René M. Castelein

Evolution of the ischio-iliac lordosis during natural growth and its relation with the pelvic incidence

European Spine Journal, 23(7):1433-1441, 2014

JCR Impact Factor: 2.066 (2014) -- Best Category: 23/72 orthopedics -- Quartile: 1

Papers in Journals

Blaž Cugmas, Maksimilijan Bregar, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Impact of contact pressure-induced spectral changes on soft-tissue classification in diffuse reflectance spectroscopy: problems and solutions

Journal of Biomedical Optics, 19(3):037002, 2014

JCR Impact Factor: 2.859 (2014) -- Best Category: 13/87 optics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Investigation of the reproducibility and reliability of sagittal vertebral inclination measurements from MR images of the spine

Computerized Medical Imaging and Graphics, 38(7):620-627, 2014

JCR Impact Factor: 1.218 (2014) -- Best Category: 53/76 engineering, biomedical -- Quartile: 3

Papers in Journals

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Near-infrared hyperspectral imaging of water evaporation dynamics for early detection of incipient caries

Journal of Dentistry, 42(10):1242-1247, 2014

JCR Impact Factor: 2.749 (2014) -- Best Category: 13/88 dentistry, oral surgery & medicine -- Quartile: 1

Papers in Journals

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Parametric modeling of the intervertebral disc space in 3D: application to CT images of the lumbar spine

Computerized Medical Imaging and Graphics, 38(7):596-605, 2014

JCR Impact Factor: 1.218 (2014) -- Best Category: 53/76 engineering, biomedical -- Quartile: 3

Papers in Journals

Jurij Jemec, Franjo Pernuš, Boštjan Likar, Miran Bürmen

Push-broom hyperspectral image calibration and enhancement by 2D deconvolution with a variant response function estimate

Optics Express, 22(22):27655-27668, 2014

JCR Impact Factor: 3.488 (2014) -- Best Category: 10/87 optics -- Quartile: 1

Papers in Journals

Blaž Bratanič, Franjo Pernuš, Boštjan Likar, Dejan Tomaževič

Real-time rotation estimation using histograms of oriented gradients

PLOS One, 9(3):e92137, 2014

JCR Impact Factor: 3.234 (2014) -- Best Category: 9/57 multidisciplinary sciences -- Quartile: 1

Papers in Journals

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Shape representation for efficient landmark-based segmentation in 3D

IEEE Transactions on Medical Imaging, 33(4):861-874, 2014

JCR Impact Factor: 3.390 (2014) -- Best Category: 18/249 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Blaž Cugmas, Miran Bürmen, Jurij Jemec, Franjo Pernuš, Boštjan Likar

Towards automated detection of milk spot livers by diffuse reflectance spectroscopy

Journal of Food Engineering, 124:128-132, 2014

JCR Impact Factor: 2.771 (2014) -- Best Category: 19/123 food science & technology -- Quartile: 1

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

An improved shape-constrained deformable model for segmentation of vertebrae from CT lumbar spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), 76-85, 2014

Papers in Conference Proceedings

Uroš Mitrović, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Automatic detection of misalignment in rigid 3D-2D registration

2nd International Workshop on Clinical Image-Based Procedures: Translational Research in Medical Imaging - CLIP 2013, held in conjunction with the 16th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, Sep 22, Nagoya, Japan (M. Erdt et al., Eds.), Lecture Notes in Computer Science 8361:117-124, 2014

Papers in Conference Proceedings

Tim Jerman, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Blob enhancement filter for computer-aided diagnosis of cerebral aneurysms

Joint MICCAI-Workshops on Computing and Visualization for Intravascular Imaging and Computer Assisted Stenting - MICCAI-CVII-STENT 2014, Sep 14, Boston, MA, USA (S.-L. Lee et al., Eds.), 14-21, 2014

Papers in Conference Proceedings

Jurij Jemec, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Characterization and modeling of point spread function in push-broom hyperspectral imaging systems for spectral and spatial resolution enhancement

SPIE Photonics West 2014: Biophotonics (BiOS), Clinical Technologies and Systems, Design and Quality for Biomedical Technologies VI, Feb 1-6, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 8936:893616, 2014

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images

1st Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2013, held in conjunctin with the 16th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2013, Sep 26, Nagoya, Japan (Yao et al., Eds.), Lecture Notes in Computational Vision and Biomechanics 17:111-121, 2014

Papers in Conference Proceedings

Robert Korez, Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Determination of the intervertebral disc space from CT images of the lumbar spine

SPIE Medical Imaging 2014: Image Processing, Feb 15-20, San Diego, CA, USA (S. Ourselin, M. A. Styner, Eds.), 9034:90342Q, 2014

Papers in Conference Proceedings

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Fast and robust 3D to 2D image registration by backprojection of gradient covariances

6th International Workshop on Biomedical Image Registration - WBIR 2014, Jul 7-8, London, UK (S. Ourselin, M. Modat, Eds.), Lecture Notes in Computer Science 8545:124-133, 2014

Papers in Conference Proceedings

Ciril Bohak, Anže Sodja, Matija Marolt, Uroš Mitrović, Franjo Pernuš

Fast segmentation, conversion and rendering of volumetric data using GPU

International Conference on Systems, Signals and Image Processing - IWSSIP 2014, May 12-15, Dubrovnik, Croatia, 239-242, 2014

Papers in Conference Proceedings

Bulat Ibragimov, Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Interpolation-based detection of lumbar vertebrae in CT spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), 65-75, 2014

Papers in Conference Proceedings

Robert Korez, Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Interpolation-based shape-constrained deformable model approach for segmentation of vertebrae from CT spine images

2nd Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2014, Sep 14, Boston, MA, USA (J. Yao et al., Eds.), 208-213, 2014

Papers in Conference Proceedings

Andraž Mehle, Marko Bukovec, Franjo Pernuš, Boštjan Likar, Dejan Tomaževič

Print localization on transparent pharmaceutical capsules

19th Computer Vision Winter Workshop - CVWW 2014, Feb 3-5, Køtiny, Czech Republic (J. Heller, Z. Kukelova, Eds.), 75-80, 2014

Papers in Conference Proceedings

Alfiia Galimzianova, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Robust mixture-parameter estimation for unsupervised segmentation of brain MR images

3rd International Workshop on Medical Computer Vision: Large Data in Medical Imaging - MCV 2013, held in conjunvtion with MICCAI 2013, Sep 26, Nagoya, Japan (B. Menze et al., Eds.), Lecture Notes in Computer Science 8331:84-94, 2014

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories

1st Workshop on Computational Methods and Clinical Applications for Spine Imaging - CSI 2013, held in conjunctin with the 16th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2013, Sep 26, Nagoya, Japan (Yao et al., Eds.), Lecture Notes in Computational Vision and Biomechanics 17:3--14, 2014

Papers in Conference Proceedings

Žiga Lesjak, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Validation and comparison of intensity based methods for change detection in serial brain images

SPIE Medical Imaging 2014: Image Perception, Observer Performance, and Technology Assessment, Feb 15-20, San Diego, CA, USA (C. R. Mello-Thoms, M. A. Kupinski, Eds.), 9037:90371C, 2014

Abstracts in Conference Proceedings

Tom P.C. Schlösser, Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Max A. Viergever, Koen L. Vincken, René M. Castelein

EPOS 33rd Annual Meeting: The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance (OP46)

Journal of Childrens Orthopaedics, 8(Suppl 1):S7-S54, 2014

Abstracts in Conference Proceedings

Tom P.C. Schlösser, Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Max A. Viergever, Koen L. Vincken, René M. Castelein

Eurospine 2014: The development of the ischio-iliac lordosis during growth as an essential adaptation towards human bipedalism and a determinant of sagittal balance (OP53)

European Spine Journal, 23(Suppl 5):S469-S496, 2014

JCR Impact Factor: 2.066 (2014) -- Best Category: 23/72 orthopedics -- Quartile: 1

Abstracts in Conference Proceedings

Maksimilijan Bregar, Miran Bürmen, Blaž Cugmas, Franjo Pernuš, Boštjan Likar

Spectral-contact-pressure planes of skin in vivo and ex vivo

Gordon Research Conference on Lasers in Medicine & Biology: from Basic Science Discovery to Translational Applications, Jul 13-18, Holderness, NH, USA, 2014

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Papers in Journals

Uroš Mitrović, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

3D-2D registration of cerebral angiograms: a method and evaluation on clinical images

IEEE Transactions on Medical Imaging, 32(8):1550-1563, 2013

JCR Impact Factor: 3.799 (2013) -- Best Category: 16/247 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

A method for characterizing illumination systems for hyperspectral imaging

Optics Express, 21(4):4841-4853, 2013

JCR Impact Factor: 3.525 (2013) -- Best Category: 6/83 optics -- Quartile: 1

Papers in Journals

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automated visual inspection of imprint quality of pharmaceutical tablets

Machine Vision and Applications, 24(1):66-73, 2013

JCR Impact Factor: 1.444 (2013) -- Best Category: 9/24 computer science, cybernetics -- Quartile: 2

Papers in Journals

Matjaž Kosec, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Characterization of a spectrograph based hyperspectral imaging system

Optics Express, 21(10):12085-12099, 2013

JCR Impact Factor: 3.525 (2013) -- Best Category: 6/83 optics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Boštjan Likar, René M. Castelein, Max A. Viergever, Franjo Pernuš

Evaluation of pelvic morphology in the sagittal plane

The Spine Journal, 13(11):1500-1509, 2013

JCR Impact Factor: 2.800 (2013) -- Best Category: 11/67 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Manual and computerized measurement of coronal vertebral inclination in MRI images: a pilot study

Clinical Radiology, 68(8):807-814, 2013

JCR Impact Factor: 1.663 (2013) -- Best Category: 63/121 radiology, nuclear medicine & medical imaging -- Quartile: 3

Papers in Journals

Blaž Cugmas, Miran Bürmen, Maksimilijan Bregar, Franjo Pernuš, Boštjan Likar

Pressure-induced near infrared spectra response as a valuable source of information for soft tissue classification

Journal of Biomedical Optics, 18(4):047002, 2013

JCR Impact Factor: 2.752 (2013) -- Best Category: 17/83 optics -- Quartile: 1

Papers in Journals

Darko Štern, Vesna Njagulj, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Quantitative vertebral morphometry based on parametric modeling of vertebral bodies in 3D

Osteoporosis International, 24(4):1357-1368, 2013

JCR Impact Factor: 4.165 (2013) -- Best Category: 30/123 endocrinology & metabolism -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Radiometric calibration and noise estimation of acousto-optic tunable filter hyperspectral imaging systems

Applied Optics, 52(15):3526-3537, 2013

JCR Impact Factor: 1.649 (2013) -- Best Category: 29/83 optics -- Quartile: 2

Papers in Conference Proceedings

Alfiia Galimzianova, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Automated segmentation of MS lesions in brain MR images using localized trimmed-likelihood estimation

SPIE Medical Imaging 2013: Image Processing, Feb 9-14, Lake Buena Vista, FL, USA (S. Ourselin, D. R. Haynor, Eds.), 8669:86693E, 2013

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Comparison of manual and computerized measurements of sagittal vertebral inclination in MR images

1st Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2013, Sep 26, Nagoya, Japan (Yao et al., Eds.), 100-110, 2013

Papers in Conference Proceedings

Uroš Mitrović, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Evaluation of 3D-2D registration methods for registration of 3D-DSA and 2D-DSA cerebral images

SPIE Medical Imaging 2013: Image Processing, Feb 9-14, Lake Buena Vista, FL, USA (S. Ourselin, D. R. Haynor, Eds.), 8669:866931, 2013

Papers in Conference Proceedings

Maksimilijan Bregar, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Influence of the training scheme on the soft tissue classification by near infrared pressure induced spectral response

Advances in Optics for Biotechnology, Medicine and Surgery XIII, Jun 2-5, Lake Tahoe, CA, USA, 2013

Papers in Conference Proceedings

Uroš Mitrović, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Method for 3D-2D registration of vascular images: application to 3D contrast agent flow visualization

1st International Workshop on Clinical Image-Based Procedures: from Planning to Intervention - CLIP 2012, held in conjunction with the 15th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, Oct 5, Nice, France (K. Drechsler et al., Eds.), Lecture Notes in Computer Science 7761:50-58, 2013

Papers in Conference Proceedings

Ciril Bohak, Simon Žagar, Anže Sodja, Peter Škrlj, Uroš Mitrović, Franjo Pernuš, Matija Marolt

Neck veins: an interactive 3D visualization of head veins

4th International Conference World Usability Day Slovenia 2013, Nov 25, Ljubljana, Slovenia (E. Stojmenova, Ed.), 64-66, 2013

Papers in Conference Proceedings

Blaž Cugmas, Maksimilijan Bregar, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Quantification of the probe contact pressure effects on the soft tissue classification in in vivo near infrared spectroscopy

16th International Conference on Near Infrared Spectroscopy - NIR 2013, Jun 2-7, La Grande-Motte, France, 2013

Papers in Conference Proceedings

Darko Štern, Vesna Njagulj, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Quantitative vertebral morphometry in 3D

SPIE Medical Imaging 2013: Image Processing, Feb 9-14, Lake Buena Vista, FL, USA (S. Ourselin, D. R. Haynor, Eds.), 8669:86690F, 2013

Papers in Conference Proceedings

Blaž Bratanič, Boštjan Likar, Franjo Pernuš, Dejan Tomaževič

Real-time in-plane rotation estimation of pharmaceutical tablets: a feature based approach

13th IAPR International Conference on Machine Vision Applications - MVA 2013, May 20-23, Kyoto, Japan, 423-426, 2013

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of vertebrae from 3D spine images by applying concepts from transportation and game theories

1st Workshop on Computational Methods and Clinical Applications for Spine Imaging - MICCAI-CSI 2013, Sep 26, Nagoya, Japan (Yao et al., Eds.), 1-12, 2013

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Statistical shape representation with landmark clustering by solving the assignment problem

SPIE Medical Imaging 2013: Image Processing, Feb 9-14, Lake Buena Vista, FL, USA (S. Ourselin, D. R. Haynor, Eds.), 8669:86690E, 2013

Abstracts in Conference Proceedings

Žiga Lesjak, Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Avtomatska zaznava časovno pogojenih morfoloških sprememb v MR slikah glave

8. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2013, 21. marec, Maribor, Slovenija (B. Potočnik, ur.), 65-71, 2013

Abstracts in Conference Proceedings

Jurij Jemec, Miran Bürmen, Boštjan Likar, Franjo Pernuš

Modeli širjenja svetlobe v optično gostih medijih in njihova uporaba pri določanju optičnih lastnosti

8. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2013, 21. marec, Maribor, Slovenija (B. Potočnik, ur.), 58-64, 2013

Abstracts in Conference Proceedings

Robert Korez, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Razgradnja medicinskih slik hrbtenice

8. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2013, 21. marec, Maribor, Slovenija (B. Potočnik, ur.), 72-79, 2013

Papers in Journals

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

A game-theoretic framework for landmark-based image segmentation

IEEE Transactions on Medical Imaging, 31(9):1761-1776, 2012

JCR Impact Factor: 4.027 (2012) -- Best Category: 8/242 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Primož Markelj, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

A review of 3D/2D registration methods for image-guided interventions

Medical Image Analysis, 16(3):642-661, 2012

JCR Impact Factor: 4.087 (2012) -- Best Category: 4/99 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Boštjan Likar, René M. Castelein, Max A. Viergever, Franjo Pernuš

A review of methods for evaluating the quantitative parameters of sagittal pelvic alignment

The Spine Journal, 12(5):433-446, 2012

JCR Impact Factor: 3.355 (2012) -- Best Category: 3/63 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Michiel M. A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Analysis of pelvic incidence from three-dimensional images of a normal population

Spine, 37(8):E479-E485, 2012

JCR Impact Factor: 2.159 (2012) -- Best Category: 17/63 orthopedics -- Quartile: 2

Papers in Journals

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Automated classification and visualization of healthy and diseased hard dental tissues by near-infrared hyperspectral imaging

Applied Spectroscopy, 66(9):1067-1074, 2012

JCR Impact Factor: 1.942 (2012) -- Best Category: 10/57 instruments & instrumentation -- Quartile: 1

Papers in Journals

Matjaž Kosec, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automated model based calibration of short-wavelength infrared (SWIR) imaging spectrographs

Applied Spectroscopy, 66(10):1128-1135, 2012

JCR Impact Factor: 1.942 (2012) -- Best Category: 10/57 instruments & instrumentation -- Quartile: 1

Papers in Journals

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Groupwise registration of multi-modal images by an efficient joint entropy minimization scheme

IEEE Transactions on Image Processing, 21(5):2546-2558, 2012

JCR Impact Factor: 3.199 (2012) -- Best Category: 17/242 engineering, electrical & electronic -- Quartile: 1

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Multi-feature mutual information image registration

Image Analysis & Stereology, 31(1):43-53, 2012

JCR Impact Factor: 0.639 (2012) -- Best Category: 14/23 imaging science & photographic technology -- Quartile: 3

Papers in Journals

Tomaž Vrtovec, Michiel M.A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Pelvic incidence: analysis in three dimensions

Journal of Bone and Joint Surgery, British Volume, 94-B(suppl. XLIV):107, 2012

JCR Impact Factor: 2.689 (2012) -- Best Category: 31/198 surgery -- Quartile: 1

Papers in Conference Proceedings

Uroš Mitrović, Žiga Špiclin, Darko Štern, Primož Markelj, Boštjan Likar, Zoran Milošević, Franjo Pernuš

3D-2D registration of cerebral angiograms based on vessel directions and intensity gradients

SPIE Medical Imaging 2012: Image Processing, Feb 4-9, San Diego, CA, USA (D. R. Haynor, S. Ourselin, Eds.), 8314:83141T, 2012

Papers in Conference Proceedings

Blaž Cugmas, Franjo Pernuš, Boštjan Likar

Analysis of soft tissue near-infrared spectra under dynamic pressure effects

SPIE Photonics West 2012: Clinical Technologies and Systems, Optical Biopsy X, Jan 21-26, San Francisco, CA, USA (R. R. Alfano, S. G. Demos, Eds.), 8220:822007, 2012

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated measurement of anterior and posterior acetabular sector angles

SPIE Medical Imaging 2012: Computer-Aided Diagnosis, Feb 4-9, San Diego, CA, USA (B. van Ginneken, C. L. Novak, Eds.), 8315:83151U, 2012

Papers in Conference Proceedings

Matjaž Kosec, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automated model-based calibration of imaging spectrographs

SPIE Photonics West 2012: Clinical Technologies and Systems, Design and Quality for Biomedical Technologies V, Jan 21-26, San Francisco, CA, USA (R. Raghavachari, R. Liang, J. Pfefer, Eds.), 8215:82150A, 2012

Papers in Conference Proceedings

Darko Štern, Miran Bürmen, Vesna Njagulj, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automatic measurement of vertebral body deformations in CT images based on a 3D parametric model

SPIE Medical Imaging 2012: Computer-Aided Diagnosis, Feb 4-9, San Diego, CA, USA (B. van Ginneken, C. L. Novak, Eds.), 8315:831510, 2012

Papers in Conference Proceedings

Žiga Špiclin, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Characterization and modeling of the spatially and spectrally varying point-spread function in hyperspectral imaging systems for computational correction of axial optical aberrations

SPIE Photonics West 2012: Clinical Technologies and Systems, Design and Quality for Biomedical Technologies V, Jan 21-26, San Francisco, CA, USA (R. Raghavachari, R. Liang, J. Pfefer, Eds.), 8215:82150R, 2012

Papers in Conference Proceedings

Tomaž Vrtovec, Michiel M.A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Computerized analysis of pelvic incidence from 3D images

SPIE Medical Imaging 2012: Image Processing, Feb 4-9, San Diego, CA, USA (D. R. Haynor, S. Ourselin, Eds.), 8314:83142G, 2012

Papers in Conference Proceedings

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Evaluation of cross-polarized near-infrared hyperspectral imaging for early detection of dental caries

SPIE Photonics West 2012: Photonic Therapeutics and Diagnostics, Lasers in Dentistry XVIII, Jan 21-26, San Francisco, CA, USA (P. Rechmann, D. Fried, Eds.), 8208:82080G, 2012

Papers in Conference Proceedings

Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Hyperspectral laser-induced autofluorescence imaging of dental caries

SPIE Photonics West 2012: Photonic Therapeutics and Diagnostics, Lasers in Dentistry XVIII, Jan 21-26, San Francisco, CA, USA (P. Rechmann, D. Fried, Eds.), 8208:82080E, 2012

Papers in Conference Proceedings

Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Improved classification and visualization of healthy and pathological hard dental tissues by modeling specular reflections in NIR hyperspectral images

SPIE Medical Imaging 2012: Computer-Aided Diagnosis, Feb 4-9, San Diego, CA, USA (B. van Ginneken, C. L. Novak, Eds.), 8315:83152N, 2012

Papers in Conference Proceedings

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Quad-tree based entropy estimator for fast and robust brain image registration

5th International Workshop on Biomedical Image Registration - WBIR 2012, Jul 7-8, Nashville, TN, USA (B. M. Dawant et al., Eds.), Lecture Notes in Computer Science 7359:160-169, 2012

Abstracts in Conference Proceedings

Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Evie E. Vereecke, Anthony J. Channon, Max A. Viergever, Koen L. Vincken, René M. Castelein

The pelvic lordosis: an essential adaptation in human evolution, and a determinant of spinopelvic alignment

19th International Meeting on Advanced Spine Techniques - IMAST 2012, 18-21 Jul, Istanbul, Turkey, 462, 2012

Other Publications

Michiel M.A. Janssen, Tomaž Vrtovec, Franjo Pernuš, F. Cumhur Öner, Evie E. Vereecke, Anthony J. Channon, Max A. Viergever, Koen L. Vincken, René M. Castelein

The pelvic lordosis: an essential adaptation in human evolution, and a determinant of spinopelvic alignment

Studies in Health Technology and Informatics, 176:462, 2012

Papers in Journals

Peter Usenik, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Automated tracking and analysis of phospholipid vesicle contours in phase contrast microscopy images

Medical & Biological Engineering & Computing, 49(8):957-966, 2011

JCR Impact Factor: 1.878 (2011) -- Best Category: 25/99 computer science, interdisciplinary applications -- Quartile: 2

Papers in Journals

Žiga Špiclin, Marko Bukovec, Franjo Pernuš, Boštjan Likar

Image registration for visual inspection of imprinted pharmaceutical tablets

Machine Vision and Applications, 22(1):197-206, 2011

JCR Impact Factor: 1.009 (2011) -- Best Category: 125/244 engineering, electrical & electronic -- Quartile: 3

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Manual and computerized measurement of sagittal vertebral inclination in computed tomography images

Spine, 36(13):E875-E881, 2011

JCR Impact Factor: 2.078 (2011) -- Best Category: 20/63 orthopedics -- Quartile: 2

Papers in Journals

Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Parametric modelling and segmentation of vertebral bodies in 3D CT and MR spine images

Physics in Medicine and Biology, 56(23):7505-7522, 2011

JCR Impact Factor: 2.829 (2011) -- Best Category: 14/72 engineering, biomedical -- Quartile: 1

Papers in Journals

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Real-time image segmentation for visual inspection of pharmaceutical tablets

Machine Vision and Applications, 22(1):145-156, 2011

JCR Impact Factor: 1.009 (2011) -- Best Category: 125/244 engineering, electrical & electronic -- Quartile: 3

Papers in Journals

Marko Bukovec, Boštjan Likar, Franjo Pernuš

Segmentation of anatomical structures by connected statistical models

Image Analysis & Stereology, 30(2):77-88, 2011

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Spectral characterization of near-infrared acousto-optic tunable filter (AOTF) hyperspectral imaging systems using standard calibration materials

Applied Spectroscopy, 65(4):393-401, 2011

JCR Impact Factor: 1.663 (2011) -- Best Category: 15/58 instruments & instrumentation -- Quartile: 2

Papers in Journals

Supriyanto Pawiro, Primož Markelj, Franjo Pernuš, Christelle Gendrin, Michael Figl, Christoph Weber, Franz Kainberger, Iris Nöbauer-Huhmann, Helga Bergmeister, Markus Stock, Dietmar Georg, Helmar Bergmann, Wolfgang Birkfellner

Validation for 2D/3D registration I: a new gold standard data set

Medical Physics, 38(3):1481 (10), 2011

JCR Impact Factor: 2.830 (2011) -- Best Category: 29/116 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Christelle Gendrin, Primož Markelj, Supriyanto Pawiro, Jakob Spoerk, Christoph Bloch, Christoph Weber, Michael Figl, Helmar Bergmann, Wolfgang Birkfellner, Boštjan Likar, Franjo Pernuš

Validation for 2D/3D registration II: the comparison of intensity- and gradient-based merit functions using a new gold standard data set

Medical Physics, 38(3):1491 (12), 2011

JCR Impact Factor: 2.830 (2011) -- Best Category: 29/116 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Conference Proceedings

Miran Bürmen, Peter Usenik, Aleš Fidler, Franjo Pernuš, Boštjan Likar

A construction of standardized near infrared hyper-spectral teeth database: a first step in the development of reliable diagnostic tool for quantification and early detection of caries

SPIE Photonics West 2011: Dental Hard Tissue and Early Caries Imaging II, Lasers in Dentistry XVII, Jan 22-27, San Francisco, CA, USA (P. Rechmann, D. Fried, Eds.), 7884:78840E, 2011

Papers in Conference Proceedings

Nika Oman, Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

A study of a visual inspection technique for in-process monitoring of coating of pharmaceutical pellets

IEEE International Conference on Industrial Technology - ICIT 2011, Mar 14-16, Auburn, AL, USA, 239-243, 2011

Papers in Conference Proceedings

Peter Usenik, Miran Bürmen, Tomaž Vrtovec, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Automated classification and visualization of healthy and pathological dental tissues based on near-infrared hyper-spectral imaging

SPIE Medical Imaging 2011: Computer-Aided Diagnosis, Feb 12-17, Lake Buena Vista, FL, USA (R. M. Summers, B. van Ginneken, Eds.), 7963:796340, 2011

Papers in Conference Proceedings

Bulat Ibragimov, Boštjan Likar, Franjo Pernuš

Boundary detection by linear programming with application to lung fields segmentation

SPIE Medical Imaging 2011: Image Processing, Feb 12-17, Lake Buena Vista, FL, USA (B. M. Dawant, D. R. Haynor, Eds.), 7962:796231, 2011

Papers in Conference Proceedings

Žiga Špiclin, Franjo Pernuš, Boštjan Likar

Correction of axial optical aberrations in hyper-spectral imaging systems

SPIE Photonics West 2011: Hyperspectral Imaging Systems, Design and Quality for Biomedical Technologies IV, Jan 22-27, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 7891:78910S, 2011

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Determination of vertebral pose in 3D by minimization of vertebral asymmetry

SPIE Medical Imaging 2011: Image Processing, Feb 12-17, Lake Buena Vista, FL, USA (B. M. Dawant, D. R. Haynor, Eds.), 7962:79620F, 2011

Papers in Conference Proceedings

Uroš Mitrović, Primož Markelj, Boštjan Likar, Zoran Milošević, Franjo Pernuš

Gradient-based 3D-2D registration of cerebral angiograms

SPIE Medical Imaging 2011: Image Processing, Feb 12-17, Lake Buena Vista, FL, USA (B. M. Dawant, D. R. Haynor, Eds.), 7962:79621P, 2011

Papers in Conference Proceedings

Žiga Špiclin, Peter Usenik, Miran Bürmen, Aleš Fidler, Franjo Pernuš, Boštjan Likar

Groupwise consistent image registration: crucial step for the construction of a standardized near infrared hyper-spectral teeth database

SPIE Medical Imaging 2011: Image Processing, Feb 12-17, Lake Buena Vista, FL, USA (B. M. Dawant, D. R. Haynor, Eds.), 7962:79622A, 2011

Papers in Conference Proceedings

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Illumination system characterization for hyperspectral imaging

SPIE Photonics West 2011: Hyperspectral Imaging Systems, Design and Quality for Biomedical Technologies IV, Jan 22-27, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 7891:78910T, 2011

Papers in Conference Proceedings

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Information-theoretic multi-modal image registration based on the improved fast Gauss transform: application to brain images

1st International Workshop on Multimodal Brain Image Analysis - MBIA 2011, held in conjunction with the 14th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2011, Sep 18, Toronto, ON, Canada (T. Liu et al., Eds.), Lecture Notes in Computer Science 7012:135-142, 2011

Papers in Conference Proceedings

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Modelling imprints of pharmaceutical tablets for imprint quality visual inspection

15th International Conference on Image Processing, Computer Vision, and Pattern Recognition - IPCV 2011, Jul 18-21, Las Vegas, NV, USA, 934-940, 2011

Papers in Conference Proceedings

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Optical character verification of print on pharmaceutical capsules

12th IAPR International Conference on Machine Vision Applications - MVA 2011, Jun 13-15, Nara, Japan (K. Yamada, Ed.), 303-306, 2011

Papers in Conference Proceedings

Bulat Ibragimov, Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Segmentation of lung fields by game theory and dynamic programming

4th International Workshop on Pulmonary Image Analysis - PIA 2011, 18 Sep, Toronto, ON, Canada, 101-111, 2011

Papers in Conference Proceedings

Darko Štern, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Segmentation of vertebral bodies in CT and MR images based on 3D deterministic models

SPIE Medical Imaging 2011: Image Processing, Feb 12-17, Lake Buena Vista, FL, USA (B. M. Dawant, D. R. Haynor, Eds.), 7962:79620D, 2011

Abstracts in Conference Proceedings

Tomaž Vrtovec, Michiel M.A. Janssen, Franjo Pernuš, René M. Castelein, Max A. Viergever

Pelvic incidence: analysis in three dimensions

11th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery - CAOS 2011, Jun 15-18, London, UK (J. P. Cobb, Ed.), 2011

Abstracts in Conference Proceedings

Blaž Cugmas, Franjo Pernuš, Boštjan Likar

Prvi koraki k vpeljavi NIR spektroskopije in hiperspekteralnega slikanja v veterinarsko medicino

6. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2011, 17. marec, Maribor, Slovenija (B. Potočnik, ur.), 67-74, 2011

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

A survey of mobile robots for distribution power line inspection

IEEE Transactions on Power Delivery, 25(1):485-493, 2010

JCR Impact Factor: 1.208 (2010) -- Best Category: 101/247 engineering, electrical & electronic -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Rok Vengust, Boštjan Likar, Franjo Pernuš

Analysis of four manual and a computerized method for measuring axial vertebral rotation in computed tomography images

Spine, 35(12):E535-E541, 2010

JCR Impact Factor: 2.510 (2010) -- Best Category: 10/61 orthopedics -- Quartile: 1

Papers in Journals

Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Automated detection of spinal centrelines, vertebral bodies and intervertebral discs in CT and MR images of lumbar spine

Physics in Medicine and Biology, 55(1):247-264, 2010

JCR Impact Factor: 3.056 (2010) -- Best Category: 11/69 engineering, biomedical -- Quartile: 1

Papers in Journals

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Deconvolution in acousto-optical tunable filter spectrometry

Applied Spectroscopy, 64(11):1265-1273, 2010

JCR Impact Factor: 1.729 (2010) -- Best Category: 15/61 instruments & instrumentation -- Quartile: 2

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Determination of axial vertebral rotation in MR images: comparison of four manual and a computerized method

European Spine Journal, 19(5):774-781, 2010

JCR Impact Factor: 1.994 (2010) -- Best Category: 20/61 orthopedics -- Quartile: 2

Papers in Journals

Miha Možina, Dejan Tomaževič, Stanko Leben, Franjo Pernuš, Boštjan Likar

Digital imaging as a process analytical technology tool for fluid-bed pellet coating process

European Journal of Pharmaceutical Sciences, 41(1):156-162, 2010

JCR Impact Factor: 3.291 (2010) -- Best Category: 68/249 pharmacology & pharmacy -- Quartile: 2

Papers in Journals

Michael Figl, Christoph Bloch, Christelle Gendrin, Christoph Weber, Supriyanto Pawiro, Johann Hummel, Primož Markelj, Franjo Pernuš, Helmar Bergmann, Wolfgang Birkfellner

Efficient implementation of the rank correlation merit function for 2D/3D registration

Physics in Medicine and Biology, 55(19):N465-N471, 2010

JCR Impact Factor: 3.056 (2010) -- Best Category: 11/69 engineering, biomedical -- Quartile: 1

Papers in Journals

Žiga Špiclin, Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Geometric calibration of a hyperspectral imaging system

Applied Optics, 49(15):2813–2818, 2010

JCR Impact Factor: 1.703 (2010) -- Best Category: 30/70 optics -- Quartile: 2

Papers in Journals

Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Spectral characterization and calibration of AOTF spectrometers and hyper-spectral imaging systems

Chemometrics and Intelligent Laboratory Systems, 101(1):23-29, 2010

JCR Impact Factor: 2.222 (2010) -- Best Category: 7/92 mathematics, interdisciplinary applications -- Quartile: 1

Papers in Journals

Primož Markelj, Boštjan Likar, Franjo Pernuš

Standardized evaluation methodology for 3D/2D registration based on the Visible Human data set

Medical Physics, 37(9):4643-4647, 2010

JCR Impact Factor: 3.070 (2010) -- Best Category: 27/111 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Conference Proceedings

Primož Markelj, Boštjan Likar, Franjo Pernuš

A new image database for 3D/2D registration based on the Visible Human data set

4th International Workshop on Biomedical Image Registration - WBIR 2010, Jul 11-13, Lübeck, Germany (B. Fischer, B. Dawant, C. Lorenz, Eds.), Lecture Notes in Computer Science 6204:151-160, 2010

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

A practical approach to spectral calibration of short wavelength infrared hyper-spectral imaging systems

SPIE Photonics West 2010: Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, Jan 23-28, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 7556:755614, 2010

Papers in Conference Proceedings

Darko Štern, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Automated determination of the centers of vertebral bodies and intervertebral discs in CT and MR lumbar spine images

SPIE Medical Imaging 2010: Image Processing, Feb 13-18, San Diego, CA, USA (B. M. Dawant, D. R. Haynor, Eds.), 7623:762350, 2010

Papers in Conference Proceedings

Peter Usenik, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Automated tracking of vesicles in phase contrast microscopy images

20th IAPR International Conference on Pattern Recognition - ICPR 2010, Aug 23-26, Istanbul, Turkey, 2520-2523, 2010

Papers in Conference Proceedings

Miran Bürmen, Miha Možina, Franjo Pernuš, Boštjan Likar

Coating film thickness of pharmaceutical pellets measured by near infrared spectroscopy

IEEE International Conference on Industrial Technology - ICIT 2010, Mar 14-17, Viña del Mar, Chile, 199-204, 2010

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Evaluation of manual and computerized methods for the determination of axial vertebral rotation

SPIE Medical Imaging 2010: Image Processing, Feb 13-18, San Diego, CA, USA (B. M. Dawant, D. R. Haynor. Eds.), 7623:76234W, 2010

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Evaluation of sagittal vertebral rotation in CT images by manual and automated methods

7th IEEE Symposium on Biomedical Imaging - ISBI 2010, Apr 14-17, Rotterdam, the Netherlands, 412-415, 2010

Papers in Conference Proceedings

Žiga Špiclin, Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Geometrical calibration of an AOTF hyper-spectral imaging system

SPIE Photonics West 2010: Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, Jan 23-28, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 7556:75560I, 2010

Papers in Conference Proceedings

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Real-time print localization on pharmaceutical capsules for automatic visual inspection

IEEE International Conference on Industrial Technology - ICIT 2010, Mar 14-17, Viña del Mar, Chile, 279-284, 2010

Papers in Conference Proceedings

Darko Štern, Boštjan Likar, Franjo Pernuš, Tomaž Vrtovec

Segmentation of vertebral bodies in MR images based on geometrical models in 3D

5th International Workshop on Medical Imaging and Augmented Reality - MIAR 2010, Sep 19-20, Beijing, China (H. Liao et al., Eds.), Lecture Notes in Computer Science 6326:419-428, 2010

Papers in Conference Proceedings

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Spectral characterization and calibration of AOTF spectrometers and hyper-spectral imaging system

SPIE Photonics West 2010: Progress in Biomedical Optics and Imaging, Design and Quality for Biomedical Technologies III, Jan 23-28, San Francisco, CA, USA (R. Raghavachari, R. Liang, Eds.), 7556:75560H, 2010

Papers in Conference Proceedings

Christelle Gendrin, Jakob Spörk, Christoph Bloch, Supriyanto Pawiro, Christoph Weber, Michael Figl, Primož Markelj, Franjo Pernuš, Dietmar Georg, Helmar Bergmann, Wolfgang Birkfellner

Towards real-time 2D/3D registration for organ motion monitoring in image-guided radiation therapy

SPIE Medical Imaging 2010: Visualization, Image-Guided Procedures, and Modeling, Feb 13-18, San Diego, CA, USA (K. H. Wong, M. I. Miga, Eds.), 7625:762512, 2010

Papers in Conference Proceedings

Miha Možina, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Visual imaging as a process analytical technology tool for the understanding and on-line monitoring of pellet coating process

IEEE International Conference on Industrial Technology - ICIT 2010, Mar 14-17, Viña del Mar, Chile, 1088-1093, 2010

Abstracts in Conference Proceedings

Matjaž Kosec, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Analiza NIR hiperspektralnih slik

5. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2010, 18. marec, Maribor, Slovenija (B. Potočnik, ur.), 53-60, 2010

Abstracts in Conference Proceedings

Peter Usenik, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Sledenje oblik fosfolipidnih veziklov zajetih s fazno kontrastno mikroskopijo

5. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2010, 18. marec, Maribor, Slovenija (B. Potočnik, ur.), 94-100, 2010

Abstracts in Conference Proceedings

Tomaž Vrtovec, Rok Vengust, Boštjan Likar, Franjo Pernuš

Symmetry of vertebral structures: can it be used to measure axial vertebral rotation?

Slovenia 2010 Spine Symposium, Apr 9-10, Ljubljana, Slovenia, 73, 2010

Books and Book Chapters

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

A climbing-flying robot for power line inspection

Chapter 6 of the book Climbing and Walking Robots (B. Miripour, Ed.), InTech, 95-109, 2010

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

A review of methods for quantitative evaluation of axial vertebral rotation

European Spine Journal, 18(8):1079-1090, 2009

JCR Impact Factor: 1.956 (2009) -- Best Category: 14/56 orthopedics -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

A review of methods for quantitative evaluation of spinal curvature

European Spine Journal, 18(5):593-607, 2009

JCR Impact Factor: 1.956 (2009) -- Best Category: 14/56 orthopedics -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

High-speed precision weighing of pharmaceutical capsules

Measurement Science and Technology, 20(11):115203, 2009

JCR Impact Factor: 1.317 (2009) -- Best Category: 47/192 engineering, multidisciplinary -- Quartile: 1

Papers in Conference Proceedings

Primož Markelj, Franjo Pernuš, Boštjan Likar

A tool for registration verification based on gradient correspondence

SPIE Medical Imaging 2009: Image Processing, Feb 7-12, Lake Buena Vista, FL, USA (J. P. W. Pluim, B. M. Dawant, Eds.), 7259:725937, 2009

Papers in Conference Proceedings

Darko Štern, Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

Automated determination of spinal centerline in CT and MR images

SPIE Medical Imaging 2009: Image Processing, Feb 7-12, Lake Buena Vista, FL, USA (J. P. W. Pluim, B. M. Dawant, Eds.), 7259:72594M, 2009

Papers in Conference Proceedings

Miha Možina, Miran Bürmen, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Automatic visual inspection of pharmaceutical pellets in coating process

IEEE International Conference on Industrial Technology - ICIT 2009, Feb 10-13, Churchill, VIC, Australia, 2009

Papers in Conference Proceedings

Jaka Katrašnik, Miran Bürmen, Franjo Pernuš, Boštjan Likar

Contrast enhancement of subcutaneous blood vessel images by means of visible and near-infrared hyper-spectral imaging

SPIE Medical Imaging 2009: Image Processing, Feb 7-12, Lake Buena Vista, FL, USA (J. P. W. Pluim, B. M. Dawant, Eds.), 7259:725927, 2009

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

High speed precision weighing of pharmaceutical capsules

IEEE International Conference on Industrial Technology - ICIT 2009, Feb 10-13, Churchill, VIC, Australia, 2009

Papers in Conference Proceedings

Primož Markelj, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Registration of 3D pre-interventional to 2D intra-interventional medical images

World Congress on Medical Physics and Biomedical Engineering 2009, Sep 7-12, Munich, Germany (O. Doessel, W. C. Schlegel, Eds.), IFMBE Proceedings 25/4:1924–1927, 2009

Papers in Conference Proceedings

Žiga Špiclin, Boštjan Likar, Franjo Pernuš

Registration of EEG electrode positions to PET and fMRI images

SPIE Medical Imaging 2009: Image Processing, Feb 7-12, Lake Buena Vista, FL, USA (J. P. W. Pluim, B. M. Dawant, Eds.), 7259:72592J, 2009

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Simulator for assessing the performance of polychromatic LED light sources

SPIE Photonics West 2009: Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Materials, Devices, and Applications for Solid State Lighting XIII, Jan 24-29, San Jose, CA, USA (K. P Streubel, H. Jeon, L.-W. Tu, Eds.), 7231:72311F, 2009

Abstracts in Conference Proceedings

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

Near-infrared imaging of subcutaneous veins

4. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2009, 19. marec, Maribor, Slovenija (B. Potočnik, ur.), 2009

Papers in Journals

Darko Škerl, Boštjan Likar, Franjo Pernuš

A protocol for evaluation of similarity measures for non-rigid registration

Medical Image Analysis, 12(1):42-54, 2008

JCR Impact Factor: 3.602 (2008) -- Best Category: 4/98 computer science, interdisciplinary applications -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

LED light sources: a survey of quality-affecting factors and methods for their assessment

Measurement Science and Technology, 19(12):122002, 2008

JCR Impact Factor: 1.493 (2008) -- Best Category: 28/176 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Quantitative analysis of spinal curvature in 3D: application to CT images of normal spine

Physics in Medicine and Biology, 53(7):1895-1908, 2008

JCR Impact Factor: 2.784 (2008) -- Best Category: 10/51 engineering, biomedical -- Quartile: 1

Papers in Journals

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Robust 3-D/2-D registration of CT and MR to X-ray images based on gradient reconstruction

International Journal of Computer Assisted Radiology and Surgery, 3(6):477-484, 2008

JCR Impact Factor: 1.481 (2011) -- Best Category: 89/199 surgery -- Quartile: 2

Papers in Journals

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Robust gradient-based 3-D/2-D registration of CT and MR to X-ray images

IEEE Transactions on Medical Imaging, 27(12):1704-1714, 2008

JCR Impact Factor: 4.004 (2008) -- Best Category: 1/98 computer science, interdisciplinary applications -- Quartile: 1

Papers in Conference Proceedings

Tomaž Vrtovec, Franjo Pernuš, Boštjan Likar

A symmetry-based method for the determination of vertebral rotation in 3D

11th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008, Sep 6-10, New York, USA (D. Metaxas et al., Eds.), Lecture Notes in Computer Science 5241:942-950, 2008

Papers in Conference Proceedings

Žiga Špiclin, Arne Hans, Frank Duffy, Simon Warfield, Boštjan Likar, Franjo Pernuš

EEG to MRI registration based on global and local similarities of MRI intensity distributions

11th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008, Sep 6-10, New York, USA (D. Metaxas et al., Eds.), Lecture Notes in Computer Science 5241:762-770, 2008

Papers in Conference Proceedings

Jaka Katrašnik, Franjo Pernuš, Boštjan Likar

New robot for power line inspection

IEEE International Conference on Robotics, Automation and Mechatronics - RAM 2008, Sep 21-24, Chengdu, China, 1195-1200, 2008

Papers in Conference Proceedings

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Robust 3D/2D registration of CT and MR to X-ray images based on gradient reconstruction

22nd International Congress and Exhibition on Computer Assisted Radiology and Surgery - CARS 2008, Jun 25-28, Barcelona, Spain (H. U. Lemke et al., Eds.), 3:S102, 2008

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Smart LED light source driver for machine vision system

SPIE Photonics West 2008: Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Research, Manufacturing, and Applications XII, Jan 19-24, San Jose, CA, USA (K. P Streubel, H. J. Jeon, Eds.), 6910:69100U, 2008

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

A review of methods for correction of intensity inhomogeneity in MRI

IEEE Transactions on Medical Imaging, 26(3):405-421, 2007

JCR Impact Factor: 3.275 (2007) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Accelerated estimation of spectral degradation of white GaN-based LEDs

Measurement Science and Technology, 18(1):230-238, 2007

JCR Impact Factor: 1.297 (2007) -- Best Category: 10/67 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Tomaž Vrtovec, Sébastien Ourselin, Lavier Gomes, Boštjan Likar, Franjo Pernuš

Automated generation of curved planar reformations from MR images of the spine

Physics in Medicine and Biology, 52(10):2865-2878, 2007

JCR Impact Factor: 2.528 (2007) -- Best Category: 9/44 engineering, biomedical -- Quartile: 1

Papers in Journals

Marko Bukovec, Žiga Špiclin, Franjo Pernuš, Boštjan Likar

Automated visual inspection of imprinted pharmaceutical tablets

Measurement Science and Technology, 18(9):2921-2930, 2007

JCR Impact Factor: 1.297 (2007) -- Best Category: 10/67 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Darko Škerl, Boštjan Likar, Michael J. Fitzpatrick, Franjo Pernuš

Comparative evaluation of similarity measures for the rigid registration of multi-modal head images

Physics in Medicine and Biology, 52(18):5587-5601, 2007

JCR Impact Factor: 2.528 (2007) -- Best Category: 9/44 engineering, biomedical -- Quartile: 1

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

3D/2D image registration: The impact of X-ray views and their number

10th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2007, Oct 29 - Nov 2, Brisbane, QLD, Australia (N. Ayache, S. Ourselin, A. Maeder, Eds.), Lecture Notes in Computer Science 4791:450-457, 2007

Papers in Conference Proceedings

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Determination of 3D location and rotation of lumbar vertebrae in CT images by symmetry-based auto-registration

SPIE Medical Imaging 2007: Image Processing, Feb 17-22, San Diego, CA, USA (J. P. W. Pluim, J. M. Reinhardt, Eds.), 6512:65121Q, 2007

Papers in Conference Proceedings

Marko Bukovec, Žiga Špiclin, Franjo Pernuš, Boštjan Likar

Geometrical and statistical visual inspection of imprinted tablets

10th IAPR International Conference on Machine Vision Applications - MVA 2007, May 16-18, Tokyo, Japan, 412-415, 2007

Papers in Conference Proceedings

Žiga Špiclin, Marko Bukovec, Franjo Pernuš, Boštjan Likar

Matching images of imprinted tablets

12th IEEE International Conference on Emerging Technologies and Factory Automation - ETFA 2007, Sep 25-28, Patras, Greece, 916-919, 2007

JCR Impact Factor: 5.561 -- Best Category: 3/87 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Conference Proceedings

Primož Markelj, Dejan Tomaževič, Franjo Pernuš, Boštjan Likar

Optimizing bone extraction in MR images for 3D/2D gradient based registration of MR and X-ray images

SPIE Medical Imaging 2007: Image Processing, Feb 17-22, San Diego, CA, USA (J. P. W. Pluim, J. M. Reinhardt, Eds.), 5612:651224-1, 2007

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Prediction of intensity and color degradation of LEDs

SPIE Photonics West 2007: Integrated Optoelectronic Devices (OPTO), Light-Emitting Diodes: Research, Manufacturing, and Applications XI, Jan 20-25, San Jose, CA, USA (K. P Streubel, H. Jeon, Eds.), 6486:64860M, 2007

Papers in Conference Proceedings

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Quality assurance of light-emitting diodes

11th International Symposium on the Science and Technology of Light Sources - Light Sources 2007, May 20-24, Shanghai, China (M. Q. Liu, R. Devonshire, Eds.), 609-610, 2007

Abstracts in Conference Proceedings

Žiga Špiclin, Marko Bukovec, Franjo Pernuš, Boštjan Likar

Poravnava slik za vizualno kontrolo kakovosti

2. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2007, 22. marec, Maribor, Slovenija (B. Potočnik, ur.), 55-64, 2007

Abstracts in Conference Proceedings

Marko Bukovec, Žiga Špiclin, Franjo Pernuš, Boštjan Likar

Vizualna kontrola kakovosti vtisnjenih farmacevtskih tablet

2. strokovna konferenca o računalniški obdelavi slik in njeni uporabi v Sloveniji - ROSUS 2007, 22. marec, Maribor, Slovenija (B. Potočnik, ur.), 65-74, 2007

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

3-D/2-D registration by integrating 2-D information in 3-D

IEEE Transactions on Medical Imaging, 25(1):17-27, 2006

JCR Impact Factor: 3.757 (2006) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Darko Škerl, Boštjan Likar, Franjo Pernuš

A protocol for evaluation of similarity measures for rigid registration

IEEE Transactions on Medical Imaging, 25(6):779-791, 2006

JCR Impact Factor: 3.757 (2006) -- Best Category: 1/11 imaging science & photographic technology -- Quartile: 1

Papers in Journals

Miran Bürmen, Franjo Pernuš, Boštjan Likar

Automated optical quality inspection of light emitting diodes

Measurement Science and Technology, 17(6):1372-1378, 2006

JCR Impact Factor: 1.228 (2006) -- Best Category: 12/66 engineering, multidisciplinary -- Quartile: 1

Papers in Journals

Darko Škerl, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Evaluation of similarity measures for reconstruction-based registration in image-guided radiotherapy and surgery

International Journal of Radiation Oncology*Biology*Physics, 65(3):943-953, 2006

JCR Impact Factor: 4.463 (2006) -- Best Category: 7/85 radiology, nuclear medicine & medical imaging -- Quartile: 1

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Intensity inhomogeneity correction of multispectral MR images

NeuroImage, 32(1):54-61, 2006

JCR Impact Factor: 5.559 (2006) -- Best Category: 1/13 neuroimaging -- Quartile: 1

Papers in Journals

Klemen Bohinc, Darko Lombardo, Veronika Kralj-Iglič, Miha Fošnarič, Sylvio May, Franjo Pernuš, Henry Hägerstrand, Aleš Iglič

Shape variation of bilayer membrane daughter vesicles induced by anisotropic membrane inclusions

Cellular and Molecular Biology Letters, 11(1):90-101, 2006

Papers in Conference Proceedings

Darko Škerl, Boštjan Likar, Franjo Pernuš

Evaluation of similarity measures for 3D/2D image registration

SPIE Medical Imaging 2006: Image Processing, Feb 11-16, San Diego, CA, USA (J. M. Reinhardt, J. P. W. Pluim, Eds.), 6144:61442F, 2006

Papers in Conference Proceedings

Darko Škerl, Boštjan Likar, Franjo Pernuš

Evaluation of similarity measures for non-rigid registration

3rd International Workshop on Biomedical Image Registration - WBIR 2006, Jul 9-11, Utrecht, the Netherlands (J. P. W. Pluim, B. Likar, F. A. Gerritsen, Eds.), Lecture Notes in Computer Science 4057:160-168, 2006

Papers in Conference Proceedings

Tomaž Vrtovec, Sébastien Ourselin, Lavier Gomes, Boštjan Likar, Franjo Pernuš

Generation of curved planar reformations from magnetic resonance images of the spine

9th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2006, Oct 1-6, Copenhagen, Denmark (R. Larsen, M. Nielsen, J. Sporring, Eds.), Lecture Notes in Computer Science 4191:135-143, 2006

Papers in Journals

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Automated curved planar reformation of 3D spine images

Physics in Medicine and Biology, 50(19):4527-4540, 2005

JCR Impact Factor: 2.683 (2005) -- Best Category: 6/41 engineering, biomedical -- Quartile: 1

Papers in Conference Proceedings

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Curved planar reformation of CT spine data

SPIE Medical Imaging 2005: Image Processing, Feb 13-17, San Diego, CA, USA (J. M. Fitzpatrick, J. M. Reinhardt, Eds.), 5747:1446-1456, 2005

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Reconstruction-based 3D/2D image registration

8th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, Oct 26-30, Palm Springs, CA, USA (J. Duncan, G. Gerig, Eds.), Lecture Notes in Computer Science 3750:231-238, 2005

Papers in Conference Proceedings

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Simultaneous correction of intensity inhomogeneity in multi-channel MR images

27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - EMBC '05, Sep 1-4, Shanghai, China, 4290-4293, 2005

Papers in Conference Proceedings

Tomaž Vrtovec, Boštjan Likar, Franjo Pernuš

Spine-based coordinate system

27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - EMBC '05, Sep 1-4, Shanghai, China, 5120-5123, 2005

Papers in Journals

Tomaž Vrtovec, Dejan Tomaževič, Boštjan Likar, Ludvik Travnik, Franjo Pernuš

Automated construction of 3D statistical shape models

Image Analysis & Stereology, 23(2):111-120, 2004

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Gold standard data for evaluation and comparison of 3D/2D registration methods

Computer Aided Surgery, 9(4):137-144, 2004

Papers in Journals

Uroš Vovk, Franjo Pernuš, Boštjan Likar

MRI intensity inhomogeneity correction by combining intensity and spatial information

Physics in Medicine and Biology, 49(17):4119-4133, 2004

JCR Impact Factor: 2.368 (2004) -- Best Category: 7/42 engineering, biomedical -- Quartile: 1

Papers in Journals

Dejan Stojaković, Rok Bernard, Franjo Pernuš, Boštjan Likar

Zajemanje svetlostno homogene in barvno kontrastne slike s pomočjo nastavljivega svetila

Elektrotehniški vestnik - Electrotechnical Review, 71:1-6, 2004

Papers in Conference Proceedings

Tomaž Vrtovec, Boštjan Likar, Dejan Tomaževič, Franjo Pernuš

Automated robust generation of compact 3D statistical shape models

SPIE Medical Imaging 2004: Image Processing, Feb 16-19, San Diego, CA, USA (J. M. Fitzpatrick, M. Sonka, Eds.), 5370:1312-1323, 2004

Papers in Conference Proceedings

Darko Škerl, Boštjan Likar, Franjo Pernuš

Evaluation of nine similarity measures used in rigid registration

17th International Conference on Pattern Recognition - ICPR 2004, Aug 23-26, Cambridge, UK (J. Kittler et al., Eds.), 794-797, 2004

Papers in Conference Proceedings

Marko Bukovec, Roel Truyen, Boštjan Likar, Rok Bernard, Franjo Pernuš

Image segmentation by connected parametrical models

SPIE Medical Imaging 2004: Image Processing, Feb 16-19, San Diego, CA, USA (J. M. Fitzpatrick, M. Sonka, Eds.), 5370:398-409, 2004

Papers in Conference Proceedings

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Multi-feature intesity inhomogeneity correction in MR images

7th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2004, Sep 26-30, Rennes Saint-Malo, France (C. Barillot, D. R. Haynor, P. Hellier, Eds.), Lecture Notes in Computer Science 3217:283-290, 2004

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Multi-feature mutual information

SPIE Medical Imaging 2004: Image Processing, Feb 16-19, San Diego, CA, USA (J. M. Fitzpatrick, M. Sonka, Eds.), 5370:143-154, 2004

Papers in Conference Proceedings

Mario Medved, Roel Truyen, Boštjan Likar, Franjo Pernuš

Segmentation and segment connection of obstructed colon

SPIE Medical Imaging 2004: Image Processing, Feb 16-19, San Diego, CA, USA (J. M. Fitzpatrick, M. Sonka, Eds.), 5370:467-474, 2004

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Tomaž Slivnik, Franjo Pernuš

3-D/2-D registration of CT and MR to X-ray images

IEEE Transactions on Medical Imaging, 22(11):1407-1416, 2003

Papers in Journals

Jože Derganc, Boštjan Likar, Franjo Pernuš

A machine vision system for measuring the eccentricity of bearings

Computers in Industry, 50(1):103-111, 2003

Papers in Journals

Jože Derganc, Boštjan Likar, Rok Bernard, Dejan Tomaževič, Franjo Pernuš

Real-time automated visual inspection of color tablets in pharmaceutical blisters

Real-Time Imaging, 9(2):113-124, 2003

Papers in Conference Proceedings

Darko Škerl, Boštjan Likar, Rok Bernard, Franjo Pernuš

A protocol for optimization-independent similarity measure evaluation

2nd International Workshop on Biomedical Image Registration - WBIR 2003, Jun 23-24, Philadelphia, PA, USA (J. C. Gee, J. B. A. Maintz, M. W. Vannier, Eds.), Lecture Notes in Computer Science 2717:330-338, 2003

Papers in Conference Proceedings

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Correction of multi-spectral MRI intensity non-uniformity via spatially regularized feature condensing

SPIE Medical Imaging 2003: Image Processing, Feb 17-20, San Diego, CA, USA (M. Sonka, J. M. Fitzpatrick, Eds.), 5032:788-794, 2003

Papers in Conference Proceedings

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Retrospective correction of MR intensity inhomogeneity via regularised feature condensing

8th Computer Vision Winter Workshop - CVWW 2003, Feb 3-6, Valtice, Czech Republic (O. Drbohlav, Ed.), 165-168, 2003

Papers in Conference Proceedings

Tomaž Vrtovec, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Statistical deformable model of a lumbar vertebra

8th Computer Vision Winter Workshop - CVWW 2003, Feb 3-6, Valtice, Czech Republic (O. Drbohlav, Ed.), 91-96, 2003

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Validation data for 2D/3D registration of medical images

8th Computer Vision Winter Workshop - CVWW 2003, Feb 3-6, Valtice, Czech Republic (O. Drbohlav, Ed.), 15-19, 2003

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Comparative evaluation of JPEG and JPEG2000 compression in quantitative digital subtraction radiography

Dentomaxillofacial Radiology, 31(6):371-384, 2002

Papers in Journals

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Comparative evaluation of retrospective shading correction methods

Journal of Microscopy, 208(3):212-223, 2002

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Impact of JPEG lossy image compression on quantitative digital subtraction radiography

Dentomaxillofacial Radiology, 31(2):106-112, 2002

Papers in Journals

Franci Lahajnar, Rok Bernard, Franjo Pernuš, Stansilav Kovačič

Machine vision system for inspecting electric plates

Computers in Industry, 47(1):113-122, 2002

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Gold standard 2D/3D registration of X-ray to CT and MR images

5th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2002, Sep 25-28, Tokyo, Japan (T. Dohi, R. Kikinis, Eds.), Lecture Notes in Computer Science 2489:461-468, 2002

Papers in Conference Proceedings

Franjo Pernuš, Rihard Karba, Rok Bernard, Jože Derganc, Boštjan Likar

Machine vision in Slovenia

Korea-Slovenia Joint Symposium on Intelligent Systems - COEX 2002, May 26, Seoul, Korea, 58-61, 2002

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Franjo Pernuš

Non-parametric segemntation of multi-spectral MR images incorporating spatial and intensity information

SPIE Medical Imaging 2002: Image Processing, Feb 24-28, San Diego, CA, USA (M. Sonka, J. M. Fitzpatrick, Eds.), 4684:391-400, 2002

Papers in Conference Proceedings

Uroš Vovk, Franjo Pernuš, Boštjan Likar

Retrospective correction of MR intensity inhomogeneity via regularised feature condensing

11. mednarodna elektrotehniška in računalniška konferenca - 11th International Electrotechnical and Computer Science Conference - ERK 2002, Sep 23-25, Portorož, Slovenia (B. Zajc, Ed.), B:271-274, 2002

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Rigid 2D/3D registration of intraoperative digital X-ray images and preoperative CT and MR images

SPIE Medical Imaging 2002: Image Processing, Feb 24-28, San Diego, CA, USA (M. Sonka, J. M. Fitzpatrick, Eds.), 4684:507-517, 2002

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Franjo Pernuš

Segmentation-based correction of spectral inhomogeneities in color images

7th Computer Vision Winter Workshop - CVWW 2002, Feb 4-7, Bad Aussee, Austria (H. Wildenauer, W. Kropatsch, Eds.), 178-187, 2002

Papers in Conference Proceedings

Boštjan Likar, Jože Derganc, Franjo Pernuš

Segmentation-based retrospective correction of intensity non-uniformity in multi-spectral MR images

SPIE Medical Imaging 2002: Image Processing, Feb 24-28, San Diego, CA, USA (M. Sonka, J. M. Fitzpatrick, Eds.), 4684:1531-1540, 2002

Papers in Conference Proceedings

Rok Bernard, Boštjan Likar, Franjo Pernuš

Statistical model-based segmentation of articulated structures

7th Computer Vision Winter Workshop - CVWW 2002, Feb 4-7, Bad Aussee, Austria (H. Wildenauer, W. Kropatsch, Eds.), 169-177, 2002

Papers in Journals

Boštjan Likar, Franjo Pernuš

A hierarchical approach to elastic registration based on mutual information

Image and Vision Computing, 19(1-2):33-44, 2001

Papers in Journals

Rok Bernard, Maša Kandušer, Franjo Pernuš

Model-based automated detection of mammalian cell colonies

Physics in Medicine and Biology, 46(11):3061-3072, 2001

Papers in Journals

Boštjan Likar, Max A. Viergever, Franjo Pernuš

Retrospective correction of MR intensity inhomogeneity by information minimization

IEEE Transactions on Medical Imaging, 20(12):1398-1410, 2001

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Rok Bernard, Dejan Tomaževič, Franjo Pernuš

Automated visual inspection of color tablets in pharmaceutical blisters

5th International Conference on Quality Control by Artificial Vision - QCAV 2001, May 21-23, Le Creusot, France, 2:415-420, 2001

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Gradient-based registration of 3D MR and 2D X-ray images

15th Congress on Computed Assisted Radiology and Surgery - CARS 2001, Jun 27-20, Berlin, Germany (H. U. Lemke, Ed.), 327-332, 2001

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Rok Bernard, Dejan Tomaževič, Franjo Pernuš

Machine vision system for quality control of color tablets in pharmaceutical blisters

10. mednarodna elektrotehniška in računalniška konferenca - 10th International Electrotechnical and Computer Science Conference - ERK 2001, Sep 24-26, Portorož, Slovenia (B. Zajc, Ed.), B:305-308, 2001

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Registration of MR and X-ray images

6th Computer Vision Winter Workshop - CVWW 2001, Feb 7-9, Bled, Slovenia (B. Likar, Ed.), 92-103, 2001

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Franjo Pernuš

Segmentation of shaded color images by non-parametric analysis of feature space

6th Computer Vision Winter Workshop - CVWW 2001, Feb 7-9, Bled, Slovenia (B. Likar, Ed.), 13-24, 2001

Papers in Conference Proceedings

Rok Bernard, Boštjan Likar, Franjo Pernuš

Segmenting articulated structures by hierarchical statistical modeling of shape, appearance, and topology

4th International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2001, Oct 14-17, Utrecht, the Netherlands (W. J. Niessen, M. A. Viergever, Eds.), Lecture Notes in Computer Science 2208:499-506, 2001

Papers in Conference Proceedings

Jože Derganc, Boštjan Likar, Franjo Pernuš

Shading correction and segmentation of color images

2nd International Symposium on Image and Signal Processing and Analysis - ISPA 2001, Jun 19-21, Pula, Croatia (S. Lončarić, H. Babić, Eds.), 345-350, 2001

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Influence of developer exhaustion on accuracy of quantitative digital subtraction radiography: an in vitro study

Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontics, 90(2):233-239, 2000

Papers in Journals

Boštjan Likar, J.B. Antoine Maintz, Max A. Viergever, Franjo Pernuš

Retrospective shading correction based on entropy minimization

Journal of Microscopy, 197(3):285-295, 2000

Papers in Journals

Rok Vengust, Matej Drobnik, Matej Daniel, Vane Antolič, Franjo Pernuš, Aleš Iglič, Veronika Kralj-Iglič

Role of magnification of standard anterior-posterior radiographs in determination of contact hip joint stress: short communication

Fángshí gäongchéng (Journal of Chinese Corrosion Engineering), 12(5):30-32, 2000

Papers in Journals

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Vpliv dolgotrajnosti razvijalca na natančnost digitalne subtrakcijske radiografije

Zobozdravstveni vestnik, 55:67-72, 2000

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

A comparison of retrospective shading correction techniques

15th International Conference on Pattern Recognition - ICPR 2000, Sep 3-7, Barcelona, Spain (A. Sanfeliu, Ed.), 3:564-567, 2000

Papers in Conference Proceedings

Jože Derganc, Franjo Pernuš

A machine vision system for inspecting bearings

Czech Pattern Recognition Workshop - CPRW 2000, Feb 2-4, Peršlak, Czech Republic (T. Svoboda, Ed.), 161-166, 2000

Papers in Conference Proceedings

Jože Derganc, Franjo Pernuš

A machine vision system for inspecting bearings

15th International Conference on Pattern Recognition - ICPR 2000, Sep 3-7, Barcelona, Spain (A. Sanfeliu, Ed.), 4:752-755, 2000

Papers in Conference Proceedings

Dejan Stojaković, Franjo Pernuš

Blister inspection by principal component analysis

9. mednarodna elektrotehniška in računalniška konferenca - 9th International Electrotechnical and Computer Science Conference - ERK 2000, Sep 21-23, Portorož, Slovenia (B. Zajc, Ed.), 249-252, 2000

Papers in Conference Proceedings

Jože Derganc, Franjo Pernuš

Color image segmentation by nonparametric analysis of feature space

9. mednarodna elektrotehniška in računalniška konferenca - 9th International Electrotechnical and Computer Science Conference - ERK 2000, Sep 21-23, Portorož, Slovenia (B. Zajc, Ed.), B:197-2000, 2000

Papers in Conference Proceedings

Boštjan Likar, J.B. Antoine Maintz, Max A. Viergever, Franjo Pernuš

Correction of intensity variations by entropy minimization

SPIE Medical Imaging 2000: Image Processing, Feb 14-17, San Diego, CA, USA (K. M. Hanson, Ed.), 3979:1350-1361, 2000

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Information-theoretic correction of MR intensity inhomogeneity

9. mednarodna elektrotehniška in računalniška konferenca - 9th International Electrotechnical and Computer Science Conference - ERK 2000, Sep 21-23, Portorož, Slovenia (B. Zajc, Ed.), B:221-224, 2000

Papers in Conference Proceedings

Boštjan Šimunič, Boštjan Likar, Vojko Valenčič, Franjo Pernuš

Inhomogeneity correction of MR images by homomorphic filtering

9. mednarodna elektrotehniška in računalniška konferenca - 9th International Electrotechnical and Computer Science Conference - ERK 2000, Sep 21-23, Portorož, Slovenia (B. Zajc, Ed.), B:225-228, 2000

Papers in Conference Proceedings

Matevž Mutec, Jurij F. Tasič, Boštjan Likar, Franjo Pernuš

Normalization of MR image intensities

9. mednarodna elektrotehniška in računalniška konferenca - 9th International Electrotechnical and Computer Science Conference - ERK 2000, Sep 21-23, Portorož, Slovenia (B. Zajc, Ed.), B:229-232, 2000

Papers in Conference Proceedings

Boštjan Likar, Max A. Viergever, Franjo Pernuš

Retrospective correction of MR intensity inhomogeneity by information minimization

3rd International Conference on Medical Image Computing and Computer Assisted Intervention - MICCAI 2000, Oct 11-14, Pittsburgh, PA, USA (S. L. Delp, A. M. DiGioia, B. Jaramaz, Eds.), Lecture Notes in Computer Science 1935:375-384, 2000

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Retrospective shading correction of microscopical images

Czech Pattern Recognition Workshop - CPRW 2000, Feb 2-4, Peršlak, Czech Republic (T. Svoboda, Ed.), 5-14, 2000

Papers in Conference Proceedings

Dejan Tomaževič, Boštjan Likar,Franjo Pernuš

Retrospective shading correction: problem, methods and evaluation

Czech Pattern Recognition Workshop - CPRW 2000, Feb 2-4, Peršlak, Czech Republic (T. Svoboda, Ed.), 15-20, 2000

Abstracts in Conference Proceedings

Aleš Fidler, Boštjan Likar, Franjo Pernuš, Uroš Skalerič

Vpliv dotrajanosti razvijalca na natančnost digitalne subtrakcijske radiografije

11. slovenski parodontološki dnevi, 14.-15. april, Terme Čatež, Slovenija, 10, 2000

Papers in Journals

Boštjan Likar, Franjo Pernuš

Automatic extraction of corresponding points for the registration of medical images

Medical Physics, 26(8):1678-1686, 1999

Papers in Journals

Jože Derganc, Franjo Pernuš

Kontrola kakovosti ležajev električnega števca z računalniškim vidom

Elektrotehniški vestnik - Electrotechnical Review, 66:292-298, 1999

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Elastic registration of muscle fibres

1st International Workshop on Biomedical Image Registration - WBIR 1999, Aug 30-31, Bled, Slovenia (F. Pernuš, et al., Eds.), 24-45, 1999

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Papers in Conference Proceedings

Jože Derganc, Franjo Pernuš

Kontrola kvalitete injekcijskih igel z računalniškim vidom

8. mednarodna elektrotehniška in računalniška konferenca - 8th International Electrotechnical and Computer Science Conference - ERK 1999, Sep 23-25, Portorož, Slovenia (B. Zajc, Ed.), B:261-264, 1999

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Matching images of muscle fibres

4th Computer Vision Winter Workshop - CVWW 1999, Feb 8-10, Rastenfeld, Austria (N. Brändle, Ed.), 90-101, 1999

Papers in Conference Proceedings

Aleš Klemenčič, Stansilav Kovačič, Franjo Pernuš

Modeling morphological changes during contraction of muscle fibres by active contours

8th International Conference on Computer Analysis of Images and Patterns - CAIP'99, Sep 1-3, Ljubljana, Slovenia (F. Solina, A. Leonardis, Eds.), Lecture Notes in Computer Science 1689:134-141, 1999

Books and Book Chapters

Franjo Pernuš, Stanislav Kovačič, H. Siegfried Stiehl, Max A. Viergever

1st International Workshop on Biomedical Image Registration, WBIR 1999, Aug 30-31, Bled, Slovenia

Proceedings, 1999

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Papers in Journals

Aleš Klemenčič, Stansilav Kovačič, Franjo Pernuš

Automated segmentation of muscle fiber images using active contour models

Cytometry, 32(4):317-326, 1998

Papers in Journals

Stanislav Kovačič, Aleš Leonardis, Franjo Pernuš

Planning sequences of views for 3-D object recognition and pose determination

Pattern Recognition, 31(10):1407-1417, 1998

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Automated point-based registration of medical images

3rd Computer Vision Winter Workshop - CVWW 1998, Feb 9-12, Gozd Martuljek, Slovenia (A. Leonardis, F. Solina, Eds.), 147-156, 1998

Papers in Conference Proceedings

Andrej Krašna, Dejan Tomaževič, Boštjan Likar, Franjo Pernuš

Automatic measurement of inhibition zones

7. mednarodna elektrotehniška in računalniška konferenca - 7th International Electrotechnical and Computer Science Conference - ERK 1998, Sep 24-26, Portorož, Slovenia (B. Zajc, Ed.), B:293-296, 1998

Papers in Conference Proceedings

Jani Pušenjak, Tadej Kotnik, Boštjan Likar, Franjo Pernuš

Image registration by the cepstrum technique

7. mednarodna elektrotehniška in računalniška konferenca - 7th International Electrotechnical and Computer Science Conference - ERK 1998, Sep 24-26, Portorož, Slovenia (B. Zajc, Ed.), B:243-246, 1998

Papers in Conference Proceedings

Jože Derganc, Franjo Pernuš

Integrirani sistemi z računalniškim vidom - kontrola kvalitete ležajev električnega števca

7. mednarodna elektrotehniška in računalniška konferenca - 7th International Electrotechnical and Computer Science Conference - ERK 1998, Sep 24-26, Portorož, Slovenia (B. Zajc, Ed.), B:285-288, 1998

Papers in Conference Proceedings

Janez Zaletelj, Boštjan Likar, Jurij F. Tasič, Franjo Pernuš

Nonlinear diffusion filtering for point-based image registration

7. mednarodna elektrotehniška in računalniška konferenca - 7th International Electrotechnical and Computer Science Conference - ERK 1998, Sep 24-26, Portorož, Slovenia (B. Zajc, Ed.), B:257-260, 1998

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Point-based medical image matching: an automatic algorithm for point extraction

SPIE Medical Imaging 1998: Image Processing, Feb 23-26, San Diego, CA, USA (K. M. Hanson, Ed.), 3338:1186-1197, 1998

Papers in Journals

Boštjan Likar, Franjo Pernuš

Evaluation of three contrast correction methods for digital subtraction in dental radiography: an in vitro study

Medical Physics, 24(2):299-307, 1997

Papers in Conference Proceedings

Rok Bernard, Boštjan Likar, Damijan Miklavčič, Franjo Pernuš

A computer vision system for counting cell colonies

Computer-Aided Data Analysis in Medicine - CADAM 1997, Nov 12, Bled, Slovenia (I. Kononenko, T. Urbančič, Eds.), 37-45, 1997

Papers in Conference Proceedings

Boštjan Likar, Franc Solina, Franjo Pernuš

Automatic image registration by optimising the parameters of the registration model

6. mednarodna elektrotehniška in računalniška konferenca - 6th International Electrotechnical and Computer Science Conference - ERK 1997, Sep 25-27, Portorož, Slovenia (B. Zajc, Ed.), B:227-280, 1997

Papers in Conference Proceedings

Franjo Pernuš, Aleš Leonardis, Stanislav Kovačič

Planning multiple views for 3-D object recognition and pose determination

7th International Conference on Computer Analysis of Images and Patterns - CAIP'97, Sep 10-12, Kiel, Germany (G. Sommer, K. Daniilidis, J. Paul, Eds.), Lecture Notes in Computer Science 1296:424-431, 1997

Abstracts in Conference Proceedings

Boštjan Likar, Rok Bernard, Franjo Pernuš

Automatic extractions of point pairs for matching 2D medical images

World Congress on Medical Physics and Biomedical Engineering: XVIII International Conference on Medical and Biological Engineering and XI International Conference on Medical Physics 1997, Sep 14-19, Nice, France, 35:713, 1997

Abstracts in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Thin-plate splines as a registration technique for digital subtraction radiography

4th Symposium on Digital Imaging in Dental Radiography, Oct 18-19, Amsterdam, the Netherlands (P. F. van der Stelt, S. M. Dunn, Eds.), Dentomaxillofacial Radiology 26(5):261-285, 1997

Papers in Journals

Vita Čebašek, Franjo Pernuš, Slavko Obreza, Marko Ambrož, Ida Eržen

Energy metabolism of fibre types within fascicles of human muscles

Pflügers Archiv - European Journal of Physiology, 431(6 Suppl):R211-R212, 1996

Papers in Conference Proceedings

Boštjan Likar, Rok Bernard, Franjo Pernuš

Contrast matching techniques for digital subtraction radiography: An objective evaluation

1996 AMIA Annual Fall Symposium, Oct 26-30, Washington, DC, USA (J. J. Cimino, Ed.), 294-298, 1996

Abstracts in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Image registration by thin-plate splines

3rd International Conference on Life Sciences 1996, Sep 21-26, Gozd Martuljek, Slovenia (I. Eržen, Z. Pajer, Eds.), 18-18, 1996

Abstracts in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Quantification of alveolar bone loss by digital subtraction radiography

3rd Annual Conference of EAVDI and IVRA 1995, Sep 6-10, Berlin, Germany, 166, 1996

Papers in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Quantification of marginal bone changes by computer-aided analysis of radiographs

4. mednarodna elektrotehniška in računalniška konferenca - 4th International Electrotechnical and Computer Science Conference - ERK 1995, Sep 25-27, Portorož, Slovenija (B. Zajc, Ed.), B:337-340, 1995

Abstracts in Conference Proceedings

Boštjan Likar, Franjo Pernuš

Diagnosis of periodontitis by digital subtraction radiography

2nd International Conference on Life Sciences 1995, Sep 23-28, Gozd Martuljek, Slovenia (S. Ribarič, R. Zorec, Eds.), 51, 1995

Books and Book Chapters

Franjo Pernuš, Ludvik Gyergyék

Zbirka rešenih nalog iz teorije vezij in sistemov

Akademska založba, 1992

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