Online adaptive re-planning in proton and radiotherapy (J2-3059)

General information

Title
Online adaptive re-planning in proton and radiotherapy
Period
Oct 1, 2021 -- Sep 30, 2024
Range
4.00 FTE
Activity
2.06 - Engineering Sciences and Technologies / Systems and Cybernetics

Abstract

Cancer and cancer treatment are among today’s primary global healthcare challenges. According to the World Health Organization cancer is a second leading cause of death globally and accounted for an estimated 9.6 million deaths (one in six deaths) in 2018, with 17 million patients newly diagnosed with cancer that same year. To alleviate the alarming status and prospects, Slovenia has committed to constructing a proton therapy center by 2023, therefore it is of even more importance to advance the know-how and collaborations with innovations and improvements in cancer treatment.
More than 50% of cancer patients are treated with radiotherapy (RT), with the aim to deliver a high therapeutic dose across several daily fractions to the tumor, while minimizing exposure to the surrounding healthy tissue. While tumor localization and patient positioning can be accurately established using image-guided RT in the treatment room, accounting for day-to-day anatomical changes is difficult. Traditional approach is by inflating tumor safety margins, but at the expense of increased exposure of organs-at-risk (OAR). We focus on online adaptive RT (ART) consisting of in-room CBCT imaging for patient positioning, quantitative verification of the current plan, potential re-planning and quality assessment, all performed within 5 minutes, while the patient is immobilized in the treatment room. The immediate benefits are improved quality of RT for a wide range of disease sites, reduction of margin, OAR exposure and toxicity and/or facilitating dose escalation and improved tumor control.
However, implementation of online ART into the clinical workflow remains extremely challenging. Besides compressed timeline, the absence of integrated RT planning, imaging and delivery systems, and the limited interoperability of commercial RT planning systems and equipment seem to be the reasons why online ART is performed in only few RT sites worldwide (about 6%).
In this proposal, we aim to bridge the major research and translational gaps by developing and validating a complete suite of advanced computational tools that are required to setup the time-constrained online ART workflow in a clinical environment. The proposed project has 11 deliverables, which involve (D1) acquisition and annotation pre-treatment planning CT/MR, pre-fraction CBCT and inter-fraction CT/MR scans and (D2) collection of associated clinical outcome measures, e.g. symptoms, toxicity, recurrence and survival. For the online ART to proceed we will develop (D3) novel automated rigid CT-MR and CT-CBCT registration and (D4) deformable CT-CBCT registration, based on genetic optimizer refined by reinforcement learning. This is followed by CT to CBCT synthesis and its (D5) autosegmentation to extract tumor and OAR contours, using recent advances in end-to-end deep learning models. Next, we will develop (D6) novel and improved ART decision-support prediction models and establish relevant trigger variables and associated thresholds, sourcing from the geometric and dosimetric features, obtained by the deformable CT-CBCT registration and (D7) a fast dose calculation algorithm, respectively. If adaptation is triggered (D8) the novel re-planning pipeline will include deep learning based dose prediction and inverse treatment plan generation and optimization. Besides (D11) expected impactful research publications, the two ultimate goals are (D9) to develop and prospectively validate a treatment planning pipeline and, finally, (D10) to integrate the developed tools into a fully functional online ART workflow and perform its validation in a prospective clinical study on head&neck and prostate cancer patients at two distinct RT sites, involving photon and proton based treatment.
Project feasibility seems warranted by the strong partners that bring together four key disciplines: clinical and industrial know-how on all aspects of RT, plus expertise and experience on medical imaging and computational sciences.

Researchers

Phases of the project and their realization

Project deliverables
1
Annotated image database
2
Database of clinical outcome measures
3
Rigid registration algorithm
4
Nonrigid registration algorithm
5
Autosegmentation algorithm
6
Adaptation triggers and decision-support models
7
Dose calculation algorithm
8
Treatment plan generation algorithm and assessment
9
Automated and validated treatment planning
10
Integrated and validated online treatment planning
11
Five or more peer review journal publications
2021
Annotated image database (Oct 1, 2021 - Sep 30, 2024)
Completed
Rigid registration algorithm (Oct 1, 2021 - Feb 28, 2023)
Completed
Nonrigid registration algorithm (Mar 1, 2021 - Feb 28, 2023)
Completed
Autosegmentation algorithm (Oct 1, 2021 - Feb 28, 2024)
Completed
Dose calculation algorithm (Oct 1, 2021 - Aug 31, 2023)
Completed
Treatment plan generation algorithm and assessment (Oct 1, 2021 - Aug 31, 2023)
Completed
2022
Annotated image database (Oct 1, 2021 - Sep 30, 2024)
Completed
Database of clinical outcome measures (Sep 1, 2022 - Sep 30, 2024)
Completed
Rigid registration algorithm (Oct 1, 2021 - Feb 28, 2023)
Completed
Nonrigid registration algorithm (Mar 1, 2021 - Feb 28, 2023)
Completed
Autosegmentation algorithm (Oct 1, 2021 - Feb 28, 2024)
Completed
Adaptation triggers and decision-support models (Jul 1, 2022 - Feb 28, 2024)
Completed
Dose calculation algorithm (Oct 1, 2021 - Aug 31, 2023)
Completed
Treatment plan generation algorithm and assessment (Oct 1, 2021 - Aug 31, 2023)
Completed
Five or more peer review journal publications (Feb 28, 2022 - Sep 30, 2024)
Completed
2023
Annotated image database (Oct 1, 2021 - Sep 30, 2024)
In progress
Database of clinical outcome measures (Sep 1, 2022 - Sep 30, 2024)
In progress
Rigid registration algorithm (Oct 1, 2021 - Feb 28, 2023)
Completed
Nonrigid registration algorithm (Mar 1, 2021 - Feb 28, 2023)
Completed
Autosegmentation algorithm (Oct 1, 2021 - Feb 28, 2024)
In progress
Adaptation triggers and decision-support models (Jul 1, 2022 - Feb 28, 2024)
In progress
Dose calculation algorithm (Oct 1, 2021 - Aug 31, 2023)
In progress
Treatment plan generation algorithm and assessment (Oct 1, 2021 - Aug 31, 2023)
In progress
Automated and validated treatment planning (Feb 28, 2023 - Sep 30, 2024)
In progress
Five or more peer review journal publications (Feb 28, 2022 - Sep 30, 2024)
In progress
2024
Annotated image database (Oct 1, 2021 - Sep 30, 2024)
Planned
Database of clinical outcome measures (Sep 1, 2022 - Sep 30, 2024)
Planned
Autosegmentation algorithm (Oct 1, 2021 - Feb 28, 2024)
Planned
Adaptation triggers and decision-support models (Jul 1, 2022 - Feb 28, 2024)
Planned
Automated and validated treatment planning (Feb 28, 2023 - Sep 30, 2024)
Planned
Integrated and validated online treatment planning (Feb 28, 2023 - Sep 30, 2024)
Planned
Five or more peer review journal publications (Feb 28, 2022 - Sep 30, 2024)
Planned

Bibliographics records

1.
Leon Jarabek, Jan Jamšek, Anka Cuderman, Sebastijan Rep, Marko Hočevar, Tomaž Kocjan, Mojca Jensterle Sever, Žiga Špiclin, Žiga Maček Ležaić, Filip Cvetko, Luka Ležaič: Detection and localization of hyperfunctioning parathyroid glands on [18F]fluorocholine PET/CT using deep learning – model performance and comparison to human experts. Radiology and Oncology, 56(4):440-452, 2022 [COBISS-ID:119825411 ] [doi:10.2478/raon-2022-0037 ]
2.
Blaž Kušnik: Deformable image registration for adaptive radiotherapy [in Slovenian language]. Master's thesis (supervisor: Žiga Špiclin), University of Ljubljani, Faculty of Electrical Engineering, 2021 [COBISS-ID:62464259 ]
3.
Martin Žukovec: Optimization of medical image registration using genetic algorithm. Master's thesis (supervisor: Žiga Špiclin), University of Ljubljani, Faculty of Electrical Engineering, 2021 [COBISS-ID:62483715 ]
4.
Urban Jeraj: Auto-contouring of organs-at-risk in medical images for radiotherapy planning. Master's thesis (supervisor: Žiga Špiclin), University of Ljubljani, Faculty of Electrical Engineering, 2021 [COBISS-ID:66199043 ]